Antisense modulation of mucin 1, transmembrane expression

Abstract

Antisense compounds, compositions and methods are provided for modulating the expression of mucin 1, transmembrane. The compositions comprise antisense compounds, particularly antisense oligonucleotides, targeted to nucleic acids encoding mucin 1, transmembrane. Methods of using these compounds for modulation of mucin 1, transmembrane expression and for treatment of diseases associated with expression of mucin 1, transmembrane are provided.

1 . A compound 8 to 50 nucleobases in length targeted to a nucleic acid molecule encoding mucin 1, transmembrane, wherein said compound specifically hybridizes with said nucleic acid molecule encoding mucin 1, transmembrane and inhibits the expression of mucin 1, transmembrane.  
     
     
         2 . The compound of  claim 1  which is an antisense oligonucleotide.  
     
     
         3 . The compound of  claim 2  wherein the antisense oligonucleotide has a sequence comprising SEQ ID NO: 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 64, 66, 67, 68, 69, 72, 74, 75, 76, 78, 79, 80, 81 88, 89, 90, 91, 93, 94, 96, 97, 98 or 99.  
     
     
         4 . The compound of  claim 2  wherein the antisense oligonucleotide comprises at least one modified internucleoside linkage.  
     
     
         5 . The compound of  claim 4  wherein the modified internucleoside linkage is a phosphorothioate linkage.  
     
     
         6 . The compound of  claim 2  wherein the antisense oligonucleotide comprises at least one modified sugar moiety.  
     
     
         7 . The compound of  claim 6  wherein the modified sugar moiety is a 2′-O-methoxyethyl sugar moiety.  
     
     
         8 . The compound of  claim 2  wherein the antisense oligonucleotide comprises at least one modified nucleobase.  
     
     
         9 . The compound of  claim 8  wherein the modified nucleobase is a 5-methylcytosine.  
     
     
         10 . The compound of  claim 2  wherein the antisense oligonucleotide is a chimeric oligonucleotide.  
     
     
         11 . A compound 8 to 50 nucleobases in length which specifically hybridizes with at least an 8-nucleobase portion of an active site on a nucleic acid molecule encoding mucin 1, transmembrane.  
     
     
         12 . A composition comprising the compound of  claim 1  and a pharmaceutically acceptable carrier or diluent.  
     
     
         13 . The composition of  claim 12  further comprising a colloidal dispersion system.  
     
     
         14 . The composition of  claim 12  wherein the compound is an antisense oligonucleotide.  
     
     
         15 . A method of inhibiting the expression of mucin 1, transmembrane in cells or tissues comprising contacting said cells or tissues with the compound of  claim 1  so that expression of mucin 1, transmembrane is inhibited.  
     
     
         16 . A method of treating an animal having a disease or condition associated with mucin 1, transmembrane comprising administering to said animal a therapeutically or prophylactically effective amount of the compound of  claim 1  so that expression of mucin 1, transmembrane is inhibited.  
     
     
         17 . The method of  claim 16  wherein the disease or condition is a hyperproliferative disorder.  
     
     
         18 . The method of  claim 16  wherein the disease or disorder is an inflammatory disorder.  
     
     
         19 . The compound of  claim 1  targeted to a nucleic acid molecule encoding mucin 1, transmembrane, wherein said compound specifically hybridizes with and differentially inhibits the expression of one of the variants of mucin 1, transmembrane relative to the remaining variants of of mucin 1, transmembrane.  
     
     
         20 . The compound of  claim 19  targeted to a nucleic acid molecule encoding of mucin 1, transmembrane, wherein said compound hybridizes with and specifically inhibits the expression of a variant of of mucin 1, transmembrane, wherein said variant is selected from the group consisting of MUC1, MUC1/Y, MUC1/X, MUC1/D, MUC1/A, MUC1/REP, MUC1/SEC, MUC1/Z, MUC1/C, MUC1-II, MUC1-III, MUC1-IV, MUC1-V, MUC1-VI, MUC1-VII, MUC1-VIII, MUC1-IX and MUC1-X.