Fungal Resistant Plants Expressing RLK1

Abstract

The present invention relates to a method of increasing resistance against fungal pathogens of the family Phacosporaceae in plants and/or plant cells. This is achieved by increasing the expression of an RLK1 protein or fragment thereof in a plant, plant part and/or plant cell in comparison to wild type plants, wild type plant parts and/or wild type plant cells. Furthermore, the invention relates to transgenic plants, plant parts, and/or plant cells having an increased resistance against fungal pathogens, in particular, pathogens of the family Phacopsoraceae, and to recombinant expression vectors comprising a sequence that is identical or homologous to a sequence encoding an RLK1 protein.

1 - 20 . (canceled) 
     
     
         21 . A method for increasing fungal resistance in a plant, a plant part, or a plant cell wherein the method comprises the step of increasing the expression and/or activity of a RLK1 protein in the plant, plant part, or plant cell in comparison to a wild type plant, wild type plant part or wild type plant cell. 
     
     
         22 . The method of  claim 21 , wherein the RLK1 protein comprises an amino acid sequence having at least 60% identity with SEQ ID NO: 10 or 2, or a functional fragment thereof, an orthologue or a paralogue thereof. 
     
     
         23 . The method of  claim 21 , wherein the RLK1 protein is encoded by:
 (i) an exogenous nucleic acid having at least 60% identity with SEQ ID NO: 9, 1, or 3, or a functional fragment thereof, an orthologue or a paralogue thereof, or a splice variant thereof;   (ii) an exogenous nucleic acid encoding a protein having at least 60% identity with SEQ ID NO: 10 or 2, or a functional fragment thereof, an orthologue or a paralogue thereof;   (iii) an exogenous nucleic acid capable of hybridizing under stringent conditions with a complementary sequence of any of the nucleic acids according to (i) or (ii); and/or by   (iv) an exogenous nucleic acid encoding the same RLK1 protein as any of the nucleic acids of (i) to (iii) above, but differing from the nucleic acids of (i) to (iii) above due to the degeneracy of the genetic code.   
     
     
         24 . The method of  claim 21 , comprising:
 (a) stably transforming a plant cell with an expression cassette comprising:
 (i) an exogenous nucleic acid having at least 60% identity with SEQ ID NO: 9, 1, or 3, or a functional fragment thereof, an orthologue or a paralogue thereof, or a splice variant thereof; 
 (ii) an exogenous nucleic acid encoding a protein having at least 60% identity with SEQ ID NO: 10 or 2, or a functional fragment thereof, an orthologue or a paralogue thereof; 
 (iii) an exogenous nucleic acid capable of hybridizing under stringent conditions with a complementary sequence of any of the nucleic acids according to (i) or (ii); and/or 
 (iv) an exogenous nucleic acid encoding the same RLK1 protein as any of the nucleic acids of (i) to (iii) above, but differing from the nucleic acids of (i) to (iii) above due to the degeneracy of the genetic code; 
 in functional linkage with a promoter; 
   (b) regenerating the plant from the plant cell; and   (c) expressing said exogenous nucleic acid.   
     
     
         25 . A recombinant vector construct comprising:
 (a) (i) a nucleic acid having at least 60% identity with SEQ ID NO: 9, 1, or 3, or a functional fragment thereof, an orthologue or a paralogue thereof, or a splice variant thereof;
 (ii) a nucleic acid encoding a protein having at least 60% identity with SEQ ID NO: 10 or 2, or a functional fragment thereof, an orthologue or a paralogue thereof; 
 (iii) a nucleic acid capable of hybridizing under stringent conditions with a complementary sequence of any of the nucleic acids according to (i) or (ii); and/or 
 (iv) a nucleic acid encoding the same RLK1 protein as any of the nucleic acids of (i) to (iii) above, but differing from the nucleic acids of (i) to (iii) above due to the degeneracy of the genetic code; 
   operably linked with   (b) a promoter; and   (c) a transcription termination sequence.   
     
     
         26 . The method of  claim 24 , wherein the promoter is a constitutive promoter, pathogen-inducible promoter, a mesophyll-specific promoter or an epidermis-specific promoter. 
     
     
         27 . The recombinant vector construct of  claim 25 , wherein the promoter is a constitutive promoter, pathogen-inducible promoter, a mesophyll-specific promoter or an epidermis-specific promoter. 
     
     
         28 . A transgenic plant, transgenic plant part, or transgenic plant cell transformed with the recombinant vector construct of  claim 25 . 
     
     
         29 . A method for the production of a transgenic plant, transgenic plant part, or transgenic plant cell having increased fungal resistance, comprising:
 (a) introducing the recombinant vector construct of  claim 25  into a plant, a plant part, or a plant cell;   (b) generating a transgenic plant, transgenic plant part, or transgenic plant cell from the plant, plant part or plant cell; and   (c) expressing the RLK1 protein encoded by:
 (i) the exogenous nucleic acid having at least 60% identity with SEQ ID NO: 9, 1, or 3, a functional fragment thereof, an orthologue or a paralogue thereof, or a splice variant thereof; 
 (ii) the exogenous nucleic acid encoding a protein having at least 60% identity with SEQ ID NO: 10 or 2, or a functional fragment thereof, an orthologue or a paralogue thereof; 
 (iii) the exogenous nucleic acid capable of hybridizing under stringent conditions with a complementary sequence of any of the nucleic acids according to (i) or (ii); and/or by 
 (iv) the exogenous nucleic acid encoding the same RLK1 protein as any of the nucleic acids of (i) to (iii) above, but differing from the nucleic acids of (i) to (iii) above due to the degeneracy of the genetic code. 
   
     
     
         30 . The method of  claim 29 , further comprising the step of harvesting the seeds of the transgenic plant and planting the seeds and growing the seeds to plants, wherein the grown plants comprise:
 (i) the exogenous nucleic acid having at least 60% identity with SEQ ID NO: 9, 1, or 3, a functional fragment thereof, an orthologue or a paralogue thereof, or a splice variant thereof;   (ii) the exogenous nucleic acid encoding a protein having at least 60% identity with SEQ ID NO: 10 or 2, or a functional fragment thereof, an orthologue or a paralogue thereof;   (iii) the exogenous nucleic acid capable of hybridizing under stringent conditions with a complementary sequence of any of the nucleic acids according to (i) or (ii); and/or   (iv) the exogenous nucleic acid encoding the same RLK1 protein as any of the nucleic acids of (i) to (iii) above, but differing from the nucleic acids of (i) to (iii) above due to the degeneracy of the genetic code.   
     
     
         31 . A harvestable part of the transgenic plant of  claim 28 . 
     
     
         32 . The harvestable part of  claim 31 , comprising a transgenic seed of the transgenic plant. 
     
     
         33 . A product derived from the transgenic plant of  claim 28 . 
     
     
         34 . The product of  claim 33 , comprising soybean meal or soy oil. 
     
     
         35 . A method for the production of a product comprising:
 a) growing the transgenic plant of  claim 28 ; and   b) producing said product from or by the plant and/or part of the plant.   
     
     
         36 . The method of  claim 35 , comprising:
 a) growing the plant and removing the harvestable parts; and   b) producing said product from or by the harvestable parts of the plant.   
     
     
         37 . The method of  claim 37 , wherein the product is meal or oil. 
     
     
         38 . The method of  claim 21 , wherein the fungal resistance is resistance against rust fungus, downy mildew, powdery mildew, leaf spot, late blight and/or  septoria.    
     
     
         39 . The method of  claim 38 , wherein the fungal resistance is a resistance against soybean rust. 
     
     
         40 . The method of  claim 39 , wherein the resistance against soybean rust is resistance against  Phakopsora meibomiae  and/or  Phakopsora pachyrhizi.    
     
     
         41 . The method of  claim 21 , wherein the plant is selected from the group consisting of beans, soya, pea, clover, kudzu, lucerne, lentils, lupins, vetches, groundnut, rice, wheat, barley,  arabidopsis , lentil, banana, canola, cotton, potato, corn, sugar cane, alfalfa, and sugar beet. 
     
     
         42 . A method for breeding a fungal resistant plant comprising:
 (a) crossing the plant of  claim 28  with a second plant;   (b) obtaining seed from the cross of step (a);   (c) planting said seeds and growing the seeds to plants; and   (d) selecting from said plants plants expressing an RLK1 protein encoded by
 (i) the exogenous nucleic acid having at least 60% identity with SEQ ID NO: 9, 1, or 3, a functional fragment thereof, an orthologue or a paralogue thereof, or a splice variant thereof; 
 (ii) the exogenous nucleic acid encoding a protein having at least 60% identity with SEQ ID NO: 10 or 2, or a functional fragment thereof, an orthologue or a paralogue thereof; 
 (iii) the exogenous nucleic acid capable of hybridizing under stringent conditions with a complementary sequence of any of the nucleic acids according to (i) or (ii); and/or by 
 (iv) the exogenous nucleic acid encoding the same RLK1 protein as any of the nucleic acids of (i) to (iii) above, but differing from the nucleic acids of (i) to (iii) above due to the degeneracy of the genetic code.