US2016375120A1PendingUtilityA1

Synthetic oligosaccharides for moraxella vaccine

51
Assignee: VISTERRA INCPriority: Apr 27, 2010Filed: Aug 19, 2016Published: Dec 29, 2016
Est. expiryApr 27, 2030(~3.8 yrs left)· nominal 20-yr term from priority
C07H 15/26G01N 2333/212A61K 39/1045C07H 15/04G01N 33/56911C07H 3/06A61K 2039/6081C07K 2317/21C07K 2317/14C07K 19/00C07K 16/1203A61P 31/04C07K 2317/20
51
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Claims

Abstract

The present invention provides synthetic Moraxella catarrhalis lipooligosaccharide (LOS)-based oligosaccharides and conjugates containing various M. catarrhalis serotype-specific oligosaccharide antigens or various core M. catarrhalis oligosaccharide structures or motifs corresponding to one or more of the three major serotypes and/or members within a given serotype. The oligosaccharides may be synthesized by a chemical assembly methodology relying on a limited number of monosaccharide and disaccharide building blocks. The invention further provides M. catarrhalis LOS-based immunogenic and immunoprotective compositions and antibodies derived therefrom for diagnosing, treating, and preventing infections caused by M. catarrhalis.

Claims

exact text as granted — not AI-modified
1 . A synthetic oligosaccharide 1a or 1b: 
       
         
           
           
               
               
           
         
       
       where each of R 1  and R 2  is independently H, a monosaccharide or a oligosaccharide, X is H or a protecting group, L is a linker, and Y is H or a carrier. 
     
     
         2 . The oligosaccharide of  claim 1 , which is 1b. 
     
     
         3 . The oligosaccharide of  claim 1 , where R 1  is H. 
     
     
         4 . The oligosaccharide of  claim 1 , where R 2  is H. 
     
     
         5 . The oligosaccharide of  claim 1 , where at least one of R 1  or R 2  is a mono-, di-, tri- or tetra-saccharide. 
     
     
         6 . The oligosaccharide of  claim 1 , where at least one of R 1  and R 2  is a monosaccharide. 
     
     
         7 . The oligosaccharide of  claim 1 , where each of R 1  and R 2  is independently a monosaccharide selected from the group consisting of Glc, Gal, and GlcNAc. 
     
     
         8 . The oligosaccharide of  claim 1 , where the oligosaccharide comprises monosaccharide units selected from the group consisting of Glc, Gal, GlcNAc, and Neu5Ac. 
     
     
         9 . The oligosaccharide of  claim 1 , where R 1  is α-Glc-(1→2). 
     
     
         10 . The oligosaccharide of  claim 1 , where R 1  is β-Gal-(1→4)-α-Glc. 
     
     
         11 . The oligosaccharide of  claim 1 , where R 1  is α-Gal-(1→4)-β-Gal-(1→4)-α-Glc. 
     
     
         12 . The oligosaccharide of  claim 1 , where R 1  is H and R 2  is H. 
     
     
         13 . The oligosaccharide of  claim 1 , where R 1  is H and R 2  is α-Glc(1→2). 
     
     
         14 . The oligosaccharide of  claim 1 , where R 1  is H and R 2  is β-Gal-(1→4)-α-GlcNAc. 
     
     
         15 . The oligosaccharide of  claim 1 , where R 1  is H and R 2  is α-Gal-(1→4)-β-Gal-(1→4)-α-GlcNAc. 
     
     
         16 . The oligosaccharide of  claim 1 , where R 1  is H and R 2  is β-Gal-(1→4)-α-Glc(1→2). 
     
     
         17 . The oligosaccharide of  claim 1 , where R 1  is H and R 2  is α-Gal-(1→4)-β-Gal-(1→4)-α-Glc(1→2). 
     
     
         18 . The oligosaccharide of  claim 1 , where R 1  is H and R 2  is α-GlcNAc(1→2). 
     
     
         19 . The oligosaccharide of  claim 1 , where R 1  is α-Glc-(1→2) and R 2  is H. 
     
     
         20 . The oligosaccharide of  claim 1 , where R 1  is α-Glc-(1→2) and R 2  is α-GlcNAc. 
     
     
         21 . The oligosaccharide of  claim 1 , where R 1  is α-Glc-(1→2) and R 2  is α-Glc-(1→2). 
     
     
         22 . The oligosaccharide of  claim 1 , where R 1  is α-Glc-(1→2) and R 2  is β-Gal-(1→4)-α-Glc. 
     
     
         23 . The oligosaccharide of  claim 1 , where R 1  is α-Glc-(1→2) and R 2  is β-Gal-(1→4)-α-GlcNAc. 
     
     
         24 . The oligosaccharide of  claim 1 , where R 1  is α-Glc-(1→2) and R 2  is α-Gal(1→4)-β-Gal(1→4)-α-Glc(1→2). 
     
     
         25 . The oligosaccharide of  claim 1 , where R 1  is α-Glc-(1→2) and R 2  is α-Gal(1→4)-β-Gal(1→4)-α-GlcNAc(1→2). 
     
     
         26 . The oligosaccharide of  claim 1 , where R 1  is β-Gal-(1→4)-α-Glc and R 2  is H. 
     
     
         27 . The oligosaccharide of  claim 1 , where R 1  is β-Gal-(1→4)-α-Glc and R 2  is α-Glc(1→2). 
     
     
         28 . The oligosaccharide of  claim 1 , where R 1  is β-Gal-(1→4)-α-Glc and R 2  is β-Gal-(1→4)-α-Glc(1→2). 
     
     
         29 . The oligosaccharide of  claim 1 , where R 1  is β-Gal-(1→4)-α-Glc and R 2  is α-Gal-(1→4)-β-Gal-(1→4)-α-Glc(1→2). 
     
     
         30 . The oligosaccharide of  claim 1 , where R 1  is β-Gal-(1→4)-α-Glc and R 2  is α-GlcNAc(1→2). 
     
     
         31 . The oligosaccharide of  claim 1 , where R 1  is β-Gal-(1→4)-α-Glc and R 2  is β-Gal-(1→4)-α-GlcNAc(1→2). 
     
     
         32 . The oligosaccharide of  claim 1 , where R 1  is β-Gal-(1→4)-α-Glc and R 2  is α-Gal-(1→4)-β-Gal-(1→4)-α-GlcNAc (1→2). 
     
     
         33 . The oligosaccharide of  claim 1 , where R 1  is α-Gal-(1→4)-β-Gal-(1→4)-α-Glc and R 2  is H. 
     
     
         34 . The oligosaccharide of  claim 1 , where R 1  is α-Gal-(1→4)-β-Gal-(1→4)-α-Glc and R 2  is α-Glc(1→2). 
     
     
         35 . The oligosaccharide of  claim 1 , where R 1  is α-Gal-(1→4)-β-Gal-(1→4)-α-Glc and R 2  is α-GlcNAc. 
     
     
         36 . The oligosaccharide of  claim 1 , where R 1  is α-Gal-(1→4)-β-Gal-(1→4)-α-Glc and R 2  is β-Gal-(1→4)-α-Glc. 
     
     
         37 . The oligosaccharide of  claim 1 , where R 1  is α-Gal-(1→4)-β-Gal-(1→4)-α-Glc and R 2  is β-Gal-(1→4)-α-GlcNAc. 
     
     
         38 . The oligosaccharide of  claim 1 , where R 1  is α-Gal-(1→4)-β-Gal-(1→4)-α-Glc and R 2  is α-Gal-(1→4)-β-Gal-(1→4)-α-Glc. 
     
     
         39 . The oligosaccharide of  claim 1 , where R 1  is α-Gal-(1→4)-β-Gal-(1→4)-α-Glc and R 2  is α-Gal-(1→4)-β-Gal-(1→4)-α-GlcNAc. 
     
     
         40 . The oligosaccharide of any one of  claims 1  to  39 , where L is an alkylene thiol linker. 
     
     
         41 . The synthetic oligosaccharide of any one of  claims 1  to  40 , where Y is a carrier selected from the group consisting of proteins, peptides, lipids, polymers, dendrimers, virosomes, and virus-like particles or combination thereof. 
     
     
         42 . The synthetic oligosaccharide of  claim 41 , where the carrier is a carrier protein. 
     
     
         43 . The synthetic oligosaccharide of  claim 42 , where the carrier protein is selected from the group consisting of bacterial toxoids, toxins, exotoxins, and nontoxic derivatives thereof. 
     
     
         44 . The synthetic oligosaccharide of  claim 43 , wherein the carrier protein is selected from the group consisting of tetanus toxoid, tetanus toxin Fragment C, diphtheria toxoid, CRM, cholera toxoid,  Staphylococcus aureus  exotoxins or toxoids,  Escherichia coli  heat labile enterotoxin,  Pseudomonas aeruginosa  exotoxin A, genetically detoxified variants thereof; bacterial outer membrane proteins, serotype B outer membrane protein complex (OMPC), outer membrane class 3 porin (rPorB), porins; keyhole limpet hemocyanine (KLH), hepatitis B virus core protein, thyroglobulin, albumins, and ovalbumin; pneumococcal surface protein A (PspA), pneumococcal adhesin protein (PsaA); purified protein derivative of tuberculin (PPD); transferrin binding proteins, peptidyl agonists of TLR-5; and derivatives and/or combinations of the above carriers. 
     
     
         45 . The synthetic oligosaccharide of  claim 44 , wherein the carrier protein is selected from the group consisting of CRM 197,  Neisseria meningitidis , bovine serum albumin (BSA), human serum albumin (HSA), poly(lysine:glutamic acid), flagellin of motile bacteria, and derivatives and/or combinations thereof. 
     
     
         46 . The synthetic oligosaccharide of  claim 44 , wherein the carrier protein is selected from the group consisting of tetanus toxoid, CRM 197, and OMPC. 
     
     
         47 . A pharmaceutical composition comprising a least one oligosaccharide of any one of  claims 1  to  46  in an effective amount to stimulate an immune response, optionally further comprising a pharmaceutically acceptable carrier. 
     
     
         48 . The pharmaceutical composition of  claim 47 , further comprising an adjuvant. 
     
     
         49 . The pharmaceutical composition of any one of  claim 47  or  48  wherein the immune response is an antigen-specific immune response. 
     
     
         50 . A composition comprising a synthetic oligosaccharide of any one of  claims 1  to  46  and a pharmaceutically acceptable vehicle. 
     
     
         51 . The composition of  claim 50 , comprising a plurality of different oligosaccharides, where each oligosaccharide is an antigen 1b. 
     
     
         52 . A composition comprising at least two oligosaccharides, wherein a first is a  M. catarrhalis  serotype C antigen and a second is a  M. catarrhalis  core antigen. 
     
     
         53 . The composition of  claim 52 , further comprising a third oligosaccharide which is a  M. catarrhalis  serotype A antigen. 
     
     
         54 . The composition of  claim 52 , further comprising a fourth oligosaccharide which is a  M. catarrhalis  serotype B antigen. 
     
     
         55 . The composition of  claim 54 , further comprising a fourth oligosaccharide which is a  M. catarrhalis  serotype B antigen. 
     
     
         56 . A composition comprising at least two oligosaccharides, wherein a first is a  M. catarrhalis  serotype B antigen and a second is a  M. catarrhalis  core antigen. 
     
     
         57 . The composition of  claim 56 , further comprising a third oligosaccharide which is a  M. catarrhalis  serotype A antigen. 
     
     
         58 . A composition comprising at least two oligosaccharides, wherein a first is a  M. catarrhalis  serotype A antigen and a second is a  M. catarrhalis  core antigen. 
     
     
         59 . A composition comprising at least two oligosaccharides, wherein a first is a  M. catarrhalis  serotype B antigen and a second is a  M. catarrhalis  serotype C antigen. 
     
     
         60 . The composition of  claim 59 , further comprising a third oligosaccharide which is a  M. catarrhalis  serotype A antigen. 
     
     
         61 . A composition comprising at least two oligosaccharides, wherein a first is a  M. catarrhalis  serotype A antigen and a second is a  M. catarrhalis  serotype C antigen. 
     
     
         62 . A composition comprising at least two oligosaccharides, wherein a first is a  M. catarrhalis  serotype A antigen and a second is a  M. catarrhalis  serotype B antigen. 
     
     
         63 . The composition of any of  claims 51  to  62 , further comprising an adjuvant. 
     
     
         64 . The composition of  claim 63 , where the adjuvant is selected from the group consisting of aluminum salts, RIBI, toll-like receptor agonists, AS01 AS02 AS03, AS04, AS05, CpG-oligodeoxynucleotide, MF-59, Montanide ISA-51 VG, Montanide ISA-720, Quil A, QS21, synthetic saponins, immunostimulating complexes, stearyl tyrosine, virus-like particles, reconstituted influenza virosomes, cytokines, mast cell activator compound 48/80, liposomes, muramyl dipeptides, SAF-1, and combinations thereof. 
     
     
         65 . The composition of any of  claims 51  to  62 , comprising an amount of at least one oligosaccharide sufficient to confer immunity against  Moraxella.    
     
     
         66 . A composition comprising an oligosaccharide of any one of  claims 1  to  46  as a vaccine. 
     
     
         67 . An antibody preparation against an oligosaccharide according to any one of  claims 1  to  41 . 
     
     
         68 . The antibody preparation of  claim 67 , where the antibody preparation comprises at least one member from the group consisting of polyclonal antibody, monoclonal antibody, mouse monoclonal IgG antibody, humanized antibody, chimeric antibody, single chain antibodies, fragment thereof, or combination thereof. 
     
     
         69 . A method of treating a disease associated with  M. catarrhalis  infection, comprising administering effective amount for inducing an immune response against  Moraxella  of an oligosaccharide of any of  claims 1  to  46  or antibody thereto. 
     
     
         70 . A method of treating a disease associated with  M. catarrhalis  infection, comprising administering to a patient in need thereof a composition of any of  claims 1  to  46 . 
     
     
         71 . The method of  claim 69  or  70 , wherein the disease is COPD. 
     
     
         72 . The method of  claim 69  or  70 , wherein the disease is AOM. 
     
     
         73 . The method of  claim 69  or  70 , wherein the patient is human. 
     
     
         74 . A method for producing antibodies comprising:
 (a) administering to a subject an effective amount of at least one oligosaccharide of any one of  claims 1  to  41 , for producing antibodies specific for  Moraxella ; optionally further comprising an adjuvant.   (b) isolating antibodies from the subject.   
     
     
         75 . A method for producing monoclonal antibodies comprising:
 (a) administering to a subject an effective amount of at least one oligosaccharide of any one of  claims 1  to  41 , for producing antibodies specific  Moraxella;      (b) isolating antibodies from the subject.   (c) fusing antibody producing cells from the subject to myeloma cells, and   (d) harvesting antibodies produced from a fusion subclone.   
     
     
         76 . The method of  claims 74  and  75 , wherein the subject is a rabbit. 
     
     
         77 . The method of  claims 74  and  75 , wherein the subject is a human. 
     
     
         78 . An antibody producing cell obtainable by performing steps (a) to (c) of  claim 75 . 
     
     
         79 . An antibody obtainable by performing steps (a) to (d) of  claim 75 . 
     
     
         80 . A method of diagnosing the presence of  Moraxella  in a sample, comprising contacting the sample with an antibody of  claim 67 ,  68 ,  78 , or  79 . 
     
     
         81 . A compound selected from the group consisting of: 
       
         
           
           
               
               
           
         
       
     
     
         82 . A compound of the formula: 
       
         
           
           
               
               
           
         
         where R is allyl or R═(CH 2 ) 3 Sac. 
       
     
     
         83 . A compound of the formula: 
       
         
           
           
               
               
           
         
       
     
     
         84 . A compound of the formula: 
       
         
           
           
               
               
           
         
       
     
     
         85 . A compound of the formula: 
       
         
           
           
               
               
           
         
       
     
     
         86 . A compound of the formula: 
       
         
           
           
               
               
           
         
         
           
           
               
               
           
         
       
     
     
         87 . A compound of the formula: 
       
         
           
           
               
               
           
         
       
     
     
         88 . A compound of the formula: 
       
         
           
           
               
               
           
         
       
     
     
         89 . A compound of the formula: 
       
         
           
           
               
               
           
         
       
     
     
         90 . A compound of the formula: 
       
         
           
           
               
               
           
         
       
     
     
         91 . A compound of the formula: 
       
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         where Y is a carrier. 
       
     
     
         92 . The compound of  claim 91 , where the carrier is a carrier protein. 
     
     
         93 . The compound of  claim 92 , where the carrier protein is selected from the group consisting of bacterial toxoids, toxins, exotoxins, and nontoxic derivatives thereof. 
     
     
         94 . The compound of  claim 92 , wherein the carrier protein is selected from the group consisting of tetanus toxoid, tetanus toxin Fragment C, diphtheria toxoid, CRM, cholera toxoid,  Staphylococcus aureus  exotoxins or toxoids,  Escherichia coli  heat labile enterotoxin,  Pseudomonas aeruginosa  exotoxin A, genetically detoxified variants thereof; bacterial outer membrane proteins, serotype B outer membrane protein complex (OMPC), outer membrane class 3 porin (rPorB), porins; keyhole limpet hemocyanine (KLH), hepatitis B virus core protein, thyroglobulin, albumins, and ovalbumin; pneumococcal surface protein A (PspA), pneumococcal adhesin protein (PsaA); purified protein derivative of tuberculin (PPD); transferrin binding proteins, peptidyl agonists of TLR-5; and derivatives and/or combinations of the above carriers. 
     
     
         95 . The compound of  claim 92 , wherein the carrier protein is selected from the group consisting of CRM 197,  Neisseria meningitides , bovine serum albumin (BSA), human serum albumin (HSA), poly(lysine:glutamic acid), flagellin of motile bacteria, and derivatives and/or combinations thereof. 
     
     
         96 . The compound of  claim 92 , wherein the carrier protein is selected from the group consisting of tetanus toxoid, CRM 197, and OMPC. 
     
     
         97 . A method of synthezing a compound of the formula: 
       
         
           
           
               
               
           
         
       
       comprising contacting a first intermediate of the formula: 
       
         
           
           
               
               
           
         
       
       with a second intermediate of the formula: 
       
         
           
           
               
               
           
         
       
       where R 7  is a Bn or is a monosaccharide or oligosaccharide;
 R 8  is a Bn or is a monosaccharide or oligosaccharide; and 
 R 9  is a protecting group or linker consisting of —CH 2 CH═CH 2 , —CH 2 CCH, pentenyl, alkenylene, oligoalkyl thiol. 
 
     
     
         98 . The method of  claim 97 , where the compound is:

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