US2020056185A1PendingUtilityA1

Compositions and methods for modulating pkk expression

Assignee: IONIS PHARMACEUTICALS INCPriority: May 1, 2014Filed: Mar 25, 2019Published: Feb 20, 2020
Est. expiryMay 1, 2034(~7.7 yrs left)· nominal 20-yr term from priority
A61P 7/10A61P 9/10A61P 43/00A61P 7/02A61P 29/00A61P 11/00C12N 2310/341C12N 15/1137A61K 47/555C12N 2310/321C12N 2310/11C07H 21/00C12N 2310/3341C12N 2310/315C12N 2310/351A61K 31/7088C12N 2310/346C12N 2310/3525C12N 2310/3515C12N 2310/345C12N 2310/3231C12N 2310/322C12N 15/113
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Claims

Abstract

Disclosed herein are antisense compounds and methods for decreasing PKK mRNA and protein expression. Such methods, compounds, and compositions are useful to treat, prevent, or ameliorate PKK-associated diseases, disorders, and conditions.

Claims

exact text as granted — not AI-modified
1 .- 219 . (canceled) 
     
     
         220 . A compound comprising a modified oligonucleotide and a conjugate group, wherein the modified oligonucleotide consists of 12 to 30 linked nucleosides and has a nucleobase sequence comprising a portion of at least 15 contiguous nucleobases that is at least 90% complementary to an equal length portion of nucleobases 33183-33242 of SEQ ID NO: 10, and wherein the conjugate group comprises at least one N-Acetylgalactosamine (GalNAc). 
     
     
         221 . The compound of  claim 220 , wherein the portion of at least 15 contiguous nucleobases is 100% complementary to the equal length portion of nucleobases 33183-33242 of SEQ ID NO: 10. 
     
     
         222 . The compound of  claim 220 , wherein the sequence of the modified oligonucleotide is SEQ ID NO: 705. 
     
     
         223 . The compound of  claim 220 , wherein the conjugate group comprises three GalNAcs. 
     
     
         224 . The compound of  claim 220 , wherein the conjugate group consists of: 
       
         
           
           
               
               
           
         
       
     
     
         225 . The compound of  claim 224 , consisting of the modified oligonucleotide and the conjugate group. 
     
     
         226 . The compound of  claim 220 , wherein the modified oligonucleotide consists of 20 linked nucleosides. 
     
     
         227 . The compound of  claim 220 , wherein the modified oligonucleotide is at least 90% complementary to SEQ ID NO: 10. 
     
     
         228 . The compound of  claim 220 , wherein at least one internucleoside linkage of the modified oligonucleotide is a phosphorothioate linkage. 
     
     
         229 . The compound of  claim 220 , wherein each cytosine of the modified oligonucleotide is a 5′-methylcytosine. 
     
     
         230 . The compound of  claim 220 , wherein the modified oligonucleotide is single-stranded. 
     
     
         231 . The compound of  claim 220 , comprising at least one 2′-O-methoxyethyl nucleoside, 2′-O-methyl nucleoside, constrained ethyl nucleoside, LNA nucleoside, or 3′-fluoro-HNA nucleoside. 
     
     
         232 . The compound of  claim 220 , wherein the modified oligonucleotide is a gapmer. 
     
     
         233 . The compound of  claim 232 , wherein the modified oligonucleotide comprises:
 a gap segment consisting of 10 linked deoxynucleosides;   a 5′ wing segment consisting of 5 linked nucleosides; and   a 3′ wing segment consisting of 5 linked nucleosides;   
       wherein the gap segment is positioned between the 5′ wing segment and the 3′ wing segment and wherein each nucleoside of each wing segment comprises a modified sugar. 
     
     
         234 . The compound of  claim 220 , wherein the compound is in the form of a salt. 
     
     
         235 . A pharmaceutical composition comprising the compound of  claim 220  and a pharmaceutically acceptable carrier or diluent. 
     
     
         236 . The pharmaceutical composition of  claim 235 , wherein the pharmaceutically acceptable carrier or diluent is phosphate buffered saline (PBS). 
     
     
         237 . The pharmaceutical composition of  claim 235 , wherein the pharmaceutical composition consists essentially of the compound and PBS. 
     
     
         238 . A method comprising administering the compound of  claim 220  to a subject in need thereof. 
     
     
         239 . The method of  claim 238 , wherein administering the compound prevents, treats, or ameliorates a PKK associated disease, disorder or condition. 
     
     
         240 . A compound comprising a modified oligonucleotide and a conjugate group, wherein the modified oligonucleotide consists of 12 to 30 linked nucleosides and has a nucleobase sequence comprising a portion of at least 15 contiguous nucleobases that is at least 90% identical to an equal length portion of a sequence selected from SEQ ID NOs: 155, 156, 157, 158, 159, 160, 261, 702, 703, 704, 705, 706, and 707, and wherein the conjugate group comprises at least one N-Acetylgalactosamine (GalNAc). 
     
     
         241 . The compound of  claim 240 , wherein the portion of at least 15 contiguous nucleobases is 100% identical to the sequence selected from SEQ ID NOs: 155, 156, 157, 158, 159, 160, 261, 702, 703, 704, 705, 706, and 707. 
     
     
         242 . The compound of  claim 240 , wherein the sequence of the modified oligonucleotide is selected from SEQ ID NOs: 155, 156, 157, 158, 159, 160, 261, 702, 703, 704, 705, 706, and 707. 
     
     
         243 . The compound of  claim 240 , wherein the conjugate group comprises three GalNAcs. 
     
     
         244 . The compound of  claim 240 , wherein the conjugate group consists of: 
       
         
           
           
               
               
           
         
       
     
     
         245 . The compound of  claim 244 , consisting of the modified oligonucleotide and the conjugate group. 
     
     
         246 . The compound of  claim 240 , wherein the modified oligonucleotide consists of 20 linked nucleosides. 
     
     
         247 . The compound of  claim 240 , wherein the modified oligonucleotide is at least 90% complementary to SEQ ID NO: 10. 
     
     
         248 . The compound of  claim 240 , wherein at least one internucleoside linkage of the modified oligonucleotide is a phosphorothioate linkage. 
     
     
         249 . The compound of  claim 240 , wherein each cytosine of the modified oligonucleotide is a 5′-methylcytosine. 
     
     
         250 . The compound of  claim 240 , wherein the modified oligonucleotide is single-stranded. 
     
     
         251 . The compound of  claim 240 , comprising at least one 2′-O-methoxyethyl nucleoside, 2′-O-methyl nucleoside, constrained ethyl nucleoside, LNA nucleoside, or 3′-fluoro-HNA nucleoside. 
     
     
         252 . The compound of  claim 240 , wherein the modified oligonucleotide is a gapmer. 
     
     
         253 . The compound of  claim 252 , wherein the modified oligonucleotide comprises:
 a gap segment consisting of 10 linked deoxynucleosides;   a 5′ wing segment consisting of 5 linked nucleosides; and   a 3′ wing segment consisting of 5 linked nucleosides;   
       wherein the gap segment is positioned between the 5′ wing segment and the 3′ wing segment and wherein each nucleoside of each wing segment comprises a modified sugar. 
     
     
         254 . The compound of  claim 240 , wherein the compound is in the form of a salt. 
     
     
         255 . A pharmaceutical composition comprising the compound of  claim 240  and a pharmaceutically acceptable carrier or diluent. 
     
     
         256 . The pharmaceutical composition of  claim 255 , wherein the pharmaceutically acceptable carrier or diluent is phosphate buffered saline (PBS). 
     
     
         257 . The pharmaceutical composition of  claim 255 , wherein the pharmaceutical composition consists essentially of the compound and PBS. 
     
     
         258 . A method comprising administering the compound of  claim 240  to a subject in need thereof. 
     
     
         259 . The method of  claim 258 , wherein administering the compound prevents, treats, or ameliorates a PKK associated disease, disorder or condition. 
     
     
         260 . A compound consisting of a modified oligonucleotide and a conjugate group, wherein the modified oligonucleotide is described by the following chemical notation: mCes mCes mCes mCes mCes Tds Tds mCds Tds Tds Tds Ads Tds Ads Gds mCes mCes Aes Ges mCe; wherein,
 A=an adenine,   mC=a 5-methylcytosine;   G=a guanine,   T=a thymine,   e=a 2′-O-methoxyethyl modified nucleoside,   d=a 2′-deoxynucleoside, and   s=a phosphorothioate internucleoside linkage, and   
       wherein the conjugate moiety is described by the following chemical structure: 
       
         
           
           
               
               
           
         
       
       and 
       wherein the 5′ end of the modified oligonucleotide is directly linked to the conjugate moiety. 
     
     
         261 . A pharmaceutical composition comprising the compound of  claim 260  and at least one of a pharmaceutically acceptable carrier or diluent. 
     
     
         262 . The pharmaceutical composition of  claim 261 , wherein the pharmaceutically acceptable carrier or diluent is PBS. 
     
     
         263 . The pharmaceutical composition of  claim 261 , wherein the pharmaceutical composition consists essentially of the compound and PBS. 
     
     
         264 . A method comprising administering the compound of  claim 260  to a subject in need thereof. 
     
     
         265 . The method of  claim 264 , wherein administering the compound prevents, treats, or ameliorates a PKK associated disease, disorder or condition.

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