US2020283479A1PendingUtilityA1

Treatments for Gastrointestinal Disorders

71
Assignee: IRONWOOD PHARMACEUTICALS INCPriority: Feb 17, 2010Filed: May 22, 2020Published: Sep 10, 2020
Est. expiryFeb 17, 2030(~3.6 yrs left)· nominal 20-yr term from priority
A61K 38/08A61P 1/04A61K 45/06C07K 7/06A61K 38/10C07K 7/08
71
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Claims

Abstract

The present invention features peptides, compositions, and related methods for treating gastrointestinal disorders and conditions, including but not limited to, irritable bowel syndrome (IBS), gastrointestinal motility disorders, functional gastrointestinal disorders, gastroesophageal reflux disease (GERD), duodenogastric reflux, Crohn's disease, ulcerative colitis, inflammatory bowel disease, functional heartburn, dyspepsia, visceral pain, gastroparesis, chronic intestinal pseudo-obstruction (or colonic pseudo-obstruction), disorders and conditions associated with constipation, and other conditions and disorders are described herein. using peptides and other agents that activate the guanylate cyclase C (GC-C) receptor.

Claims

exact text as granted — not AI-modified
What is claimed is: 
     
         1 . A peptide or a pharmaceutically acceptable salt thereof, wherein the peptide comprises the amino acid sequence Cys Cys Glu Tyr Cys Cys Asn Pro Ala Cys Thr Gly Cys Tyr, wherein
 at least one carboxyl group of the peptide is an alkyl ester having the formula (—COOR) in which R is a C 1-6  alkyl.   
     
     
         2 . The peptide or a pharmaceutically acceptable salt thereof according to  claim 1 , wherein the peptide comprises the amino acid structure of: 
       
         
           
           
               
               
           
         
       
       or a pharmaceutically acceptable salt thereof, wherein R′ is H or a C 1-6  alkyl, and at least one R′ is C 1-6  alkyl. 
     
     
         3 . The peptide or pharmaceutically acceptable salt thereof according to  claim 1 , wherein the peptide comprises the amino acid structure of: 
       
         
           
           
               
               
           
         
         wherein R is a C 1-6  alkyl. 
       
     
     
         4 . The peptide or pharmaceutically acceptable salt thereof according to any one of  claim 1  or  3 , wherein R is a C 1-4  alkyl. 
     
     
         5 . The peptide or pharmaceutically acceptable salt thereof according to any one of  claim 1 ,  3 , or  4 , wherein R is methyl. 
     
     
         6 . The peptide or pharmaceutically acceptable salt thereof according to any one of  claim 1 ,  3 , or  4 , wherein R is ethyl. 
     
     
         7 . The peptide or pharmaceutically acceptable salt thereof according to any one of  claim 1 ,  3 , or  4 , wherein R is propyl. 
     
     
         8 . The peptide or pharmaceutically acceptable salt thereof according to any one of  claim 1 ,  3 ,  4 , or  6  wherein the peptide comprises the amino acid structure of: 
       
         
           
           
               
               
           
         
       
     
     
         9 . The peptide or pharmaceutically acceptable salt thereof according to any one of  claim 1 ,  3 ,  4 , or  7  wherein the peptide comprises the amino acid structure of: 
       
         
           
           
               
               
           
         
       
     
     
         10 . The peptide or pharmaceutically acceptable salt thereof according to any one of  claim 1 ,  3 ,  4 , or  5  wherein the peptide comprises the amino acid structure of: 
       
         
           
           
               
               
           
         
       
     
     
         11 . The peptide or pharmaceutically acceptable salt thereof according to  claim 1 , wherein the peptide comprises the amino acid structure of: 
       
         
           
           
               
               
           
         
         wherein R is C 1-6  alkyl. 
       
     
     
         12 . The peptide or pharmaceutically acceptable salt thereof according to any one of  claim 1  or  11 , wherein R is a C 1-4  alkyl. 
     
     
         13 . The peptide or pharmaceutically acceptable salt thereof according to any one of  claim 1 ,  11 , or  12 , wherein R is methyl. 
     
     
         14 . The peptide or pharmaceutically acceptable salt thereof according to any one of  claim 1 ,  11 , or  12 , wherein R is ethyl. 
     
     
         15 . The peptide or pharmaceutically acceptable salt thereof according to any one of  claim 1 ,  11 , or  12 , wherein R is propyl. 
     
     
         16 . The peptide or pharmaceutically acceptable salt thereof according to any one of  claim 1 ,  11 ,  12 , or  14 , wherein the peptide comprises the amino acid structure of: 
       
         
           
           
               
               
           
         
       
     
     
         17 . The peptide or pharmaceutically acceptable salt thereof according to any one of  claim 1 ,  11 ,  12 , or  15 , wherein the peptide comprises the amino acid structure of: 
       
         
           
           
               
               
           
         
       
     
     
         18 . The peptide or pharmaceutically acceptable salt thereof according to any one of  claim 1 ,  11 ,  12 , or  13 , wherein the peptide comprises the amino acid structure of: 
       
         
           
           
               
               
           
         
       
     
     
         19 . A peptide or a pharmaceutically acceptable salt thereof, wherein the peptide comprises the amino acid structure of: 
       
         
           
           
               
               
           
         
       
     
     
         20 . A peptide or a pharmaceutically acceptable salt thereof, wherein the peptide consists of the amino acid sequence Cys Cys Glu Tyr Cys Cys Asn Pro Ala Cys Thr Gly Cys Tyr, wherein
 at least one carboxyl group of the peptide is an alkyl ester having the formula (—COOR) in which R is a C 1-6  alkyl.   
     
     
         21 . The peptide or a pharmaceutically acceptable salt thereof according to  claim 20 , wherein the peptide consists of the amino acid structure of: 
       
         
           
           
               
               
           
         
       
       or a pharmaceutically acceptable salt thereof, wherein R′ is H or a C 1-6  alkyl, and at least one R′ is C 1-6  alkyl. 
     
     
         22 . The peptide or pharmaceutically acceptable salt thereof according to  claim 20 , wherein the peptide consists of the amino acid structure of: 
       
         
           
           
               
               
           
         
         wherein R is a C 1-6  alkyl. 
       
     
     
         23 . The peptide or pharmaceutically acceptable salt thereof according to any one of  claim 20  or  22 , wherein R is a C 1-4  alkyl. 
     
     
         24 . The peptide or pharmaceutically acceptable salt thereof according to any one of  claim 20 ,  22 , or  23 , wherein R is methyl. 
     
     
         25 . The peptide or pharmaceutically acceptable salt thereof according to any one of  claim 20 ,  22 , or  23 , wherein R is ethyl. 
     
     
         26 . The peptide or pharmaceutically acceptable salt thereof according to any one of  claim 20 ,  22 , or  23 , wherein R is propyl. 
     
     
         27 . The peptide or pharmaceutically acceptable salt thereof according to any one of  claim 20 ,  22 ,  23 , or  25 , wherein the peptide consists of the amino acid structure of: 
       
         
           
           
               
               
           
         
       
     
     
         28 . The peptide or pharmaceutically acceptable salt thereof according to any one of  claim 20 ,  22 ,  23 , or  26 , wherein the peptide consists of the amino acid structure of: 
       
         
           
           
               
               
           
         
       
     
     
         29 . The peptide or pharmaceutically acceptable salt thereof according to any one of  claim 20 ,  22 ,  23 , or  24 , wherein the peptide consists of the amino acid structure of: 
       
         
           
           
               
               
           
         
       
     
     
         30 . A peptide or pharmaceutically acceptable salt thereof according to  claim 20 , wherein the peptide consists of the amino acid structure of: 
       
         
           
           
               
               
           
         
         wherein R is C 1-6  alkyl. 
       
     
     
         31 . The peptide or pharmaceutically acceptable salt thereof according to any one of  claim 20  or  30 , wherein R is a C 1-4  alkyl. 
     
     
         32 . The peptide or pharmaceutically acceptable salt thereof according to any one of  claim 20 ,  30 , or  31 , wherein R is methyl. 
     
     
         33 . The peptide or pharmaceutically acceptable salt thereof according to any one of  claim 20 ,  30 , or  31 , wherein R is ethyl. 
     
     
         34 . The peptide or pharmaceutically acceptable salt thereof according to any one of  claim 20 ,  30 , or  31 , wherein R is propyl. 
     
     
         35 . The peptide or pharmaceutically acceptable salt thereof according to any one of  claim 20 ,  30 ,  31 , or  33 , wherein the peptide consists of the amino acid structure of: 
       
         
           
           
               
               
           
         
       
     
     
         36 . The peptide or pharmaceutically acceptable salt thereof according to any one of  claim 20 ,  30 ,  31 , or  34 , wherein the peptide consists of the amino acid structure of: 
       
         
           
           
               
               
           
         
       
     
     
         37 . The peptide or pharmaceutically acceptable salt thereof according to any one of  claim 20 ,  30 ,  31 , or  32 , wherein the peptide consists of the amino acid structure of: 
       
         
           
           
               
               
           
         
       
     
     
         38 . A peptide or pharmaceutically acceptable salt thereof, wherein the peptide consists of the amino acid structure of: 
       
         
           
           
               
               
           
         
       
     
     
         39 . The peptide or pharmaceutically acceptable salt thereof according to any one of  claims 1 - 38 , wherein the peptide activates the guanylate cyclase C receptor. 
     
     
         40 . The peptide or pharmaceutically acceptable salt thereof according to any one of  claim 1 - 19  or  39 , wherein the peptide comprises 30 or fewer amino acids. 
     
     
         41 . The peptide or pharmaceutically acceptable salt thereof according to any one of  claim 1 - 19  or  39 , wherein the peptide comprises 20 or fewer amino acids. 
     
     
         42 . The peptide or pharmaceutically acceptable salt thereof according to any one of  claim 1 - 19  or  39 , wherein fewer than five amino acids precede the first Cys residue of the amino acid sequence. 
     
     
         43 . The peptide or pharmaceutically acceptable salt thereof according to any one of  claims 1 - 42 , wherein said peptide or pharmaceutically acceptable salt thereof is isolated. 
     
     
         44 . The peptide or pharmaceutically acceptable salt thereof according to any one of  claims 1 - 43 , wherein said peptide or pharmaceutically acceptable salt thereof is purified. 
     
     
         45 . A pharmaceutical composition comprising a peptide or pharmaceutically acceptable salt thereof according to any one of  claims 1 - 44 . 
     
     
         46 . A pharmaceutical composition comprising two or more peptides or pharmaceutically acceptable salts thereof according to any one of  claims 1 - 44 . 
     
     
         47 . A pharmaceutical composition comprising two or more peptides selected from:
 i. a peptide or a pharmaceutically acceptable salt thereof, wherein the peptide comprises the amino acid structure of:   
       
         
           
           
               
               
           
         
         ii. a peptide or a pharmaceutically acceptable salt thereof, wherein the peptide comprises an amino acid structure of: 
       
       
         
           
           
               
               
           
         
       
       and
 iii. a peptide or a pharmaceutically acceptable salt thereof, wherein the peptide comprises the amino acid sequence Cys Cys Glu Tyr Cys Cys Asn Pro Ala Cys Thr Gly Cys Tyr, wherein at least one carboxyl group of the peptide is an alkyl ester having the formula (—COOR) in which R is a C 1-6  alkyl. 
 
     
     
         48 . A pharmaceutical composition comprising linaclotide and a peptide or a pharmaceutically acceptable salt thereof, wherein the peptide comprises an amino acid structure of: 
       
         
           
           
               
               
           
         
         and the peptide or pharmaceutically acceptable salt thereof comprises less than 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, or 90% by weight compared to the weight of linaclotide. 
       
     
     
         49 . A pharmaceutical composition comprising linaclotide and a peptide or a pharmaceutically acceptable salt thereof, wherein the peptide comprises an amino acid structure of: 
       
         
           
           
               
               
           
         
         and the peptide or pharmaceutically acceptable salt thereof comprises less than 9%, 8%, 7%, 6%, 5%, 4%, 3%, 2%, or 1% by weight compared to the weight of linaclotide. 
       
     
     
         50 . A pharmaceutical composition comprising linaclotide and a peptide or a pharmaceutically acceptable salt thereof, wherein the peptide comprises an amino acid structure of: 
       
         
           
           
               
               
           
         
         and the peptide or pharmaceutically acceptable salt thereof comprises less than 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, or 90% by weight compared to the weight of linaclotide. 
       
     
     
         51 . A pharmaceutical composition comprising linaclotide and a peptide or a pharmaceutically acceptable salt thereof, wherein the peptide comprises an amino acid structure of: 
       
         
           
           
               
               
           
         
         and the peptide or pharmaceutically acceptable salt thereof comprises less than 9%, 8%, 7%, 6%, 5%, 4%, 3%, 2%, or 1% by weight compared to the weight of linaclotide. 
       
     
     
         52 . A pharmaceutical composition comprising linaclotide and a peptide or a pharmaceutically acceptable salt thereof, wherein the peptide comprises an amino acid structure of: 
       
         
           
           
               
               
           
         
         and the peptide or pharmaceutically acceptable salt thereof comprises less than 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, or 90% by weight compared to the weight of linaclotide. 
       
     
     
         53 . A pharmaceutical composition comprising linaclotide and a peptide or a pharmaceutically acceptable salt thereof, wherein the peptide comprises an amino acid structure of: 
       
         
           
           
               
               
           
         
         and the peptide or pharmaceutically acceptable salt thereof comprises less than 9%, 8%, 7%, 6%, 5%, 4%, 3%, 2%, or 1% by weight compared to the weight of linaclotide. 
       
     
     
         54 . A pharmaceutical composition comprising a peptide or pharmaceutically acceptable salt thereof, wherein the peptide consists of the amino acid structure of: 
       
         
           
           
               
               
           
         
         and the peptide comprises at least 90% by weight compared to the weight of linaclotide or another guanylate cyclase C agonist. 
       
     
     
         55 . A pharmaceutical composition consisting essentially of a peptide or pharmaceutically acceptable salt thereof, wherein the peptide comprises the amino acid structure of: 
       
         
           
           
               
               
           
         
       
     
     
         56 . The pharmaceutical composition according to any one of  claims 45 - 55 , further comprising one or more agents selected from (i) a cation selected from Mg 2+ , Ca 2+ , Zn 2+ , Mn 2+ , K + , Na +  or Al 3+ , or (ii) a sterically hindered primary amine. 
     
     
         57 . A pharmaceutical composition comprising a pharmaceutically acceptable carrier, a peptide according to any one of  claims 1 - 44  and one or more agents selected from (i) a cation selected from Mg 2+ , Ca 2+ , Zn 2+ , Mn 2+ , K + , Na +  or Al 3+ , or (ii) a sterically hindered primary amine. 
     
     
         58 . The pharmaceutical composition according to  claim 56  or  57 , wherein said agent is Mg 2+ , Ca 2+ , Zn 2+ , Mn 2+ , K + , Na +  or Al 3+ . 
     
     
         59 . The pharmaceutical composition according to  claim 58 , wherein said Mg 2+ , Ca 2+ , Zn 2+ , Mn 2+ , K + , Na +  or Al 2+  is provided as magnesium acetate, magnesium chloride, magnesium phosphate, magnesium sulfate, calcium acetate, calcium chloride, calcium phosphate, calcium sulfate, zinc acetate, zinc chloride, zinc phosphate, zinc sulfate, manganese acetate, manganese chloride, manganese phosphate, manganese sulfate, potassium acetate, potassium chloride, potassium phosphate, potassium sulfate, sodium acetate, sodium chloride, sodium phosphate, sodium sulfate, aluminum acetate, aluminum chloride, aluminum phosphate or aluminum sulfate. 
     
     
         60 . The pharmaceutical composition according to  claim 56  or  57 , wherein said agent is a sterically hindered primary amine. 
     
     
         61 . The pharmaceutical composition according to  claim 60 , wherein the sterically hindered primary amine is an amino acid. 
     
     
         62 . The pharmaceutical composition according to  claim 61 , wherein the amino acid is a naturally-occurring amino acid, a non-naturally occurring amino acid or an amino acid derivative. 
     
     
         63 . The pharmaceutical composition according to  claim 62 , wherein the naturally-occurring amino acid is histidine, phenylalanine, alanine, glutamic acid, aspartic acid, glutamine, leucine, methionine, asparagine, tyrosine, threonine, isoleucine, tryptophan or valine or the non-naturally occurring amino acid is 1-aminocyclohexane carboxylic acid, lanthanine or theanine. 
     
     
         64 . The pharmaceutical composition according to  claim 60 , wherein the sterically hindered primary amine has the formula: 
       
         
           
           
               
               
           
         
       
       wherein R 1 , R 2  and R 3  are independently selected from: H, C(O)OH, C1-C6 alkyl, C1-C6 alkylether, C1-C6 alkylthioether, C1-C6 alkyl carboxylic acid, C1-C6 alkyl carboxylamide and alkylaryl, wherein any group can be singly or multiply substituted with: halogen or amino, and provided that no more than one of R 1 , R 2  and R 3  is H. 
     
     
         65 . The pharmaceutical composition according to  claim 64 , wherein the sterically hindered primary amine is cyclohexylamine or 2-methylbutylamine. 
     
     
         66 . The pharmaceutical composition according to  claim 60 , wherein the sterically hindered primary amine is a polymeric amine. 
     
     
         67 . The pharmaceutical composition according to  claim 66 , wherein the polymeric amine is chitosan. 
     
     
         68 . The pharmaceutical composition according to any one of  claims 60 - 67 , wherein said pharmaceutical composition further comprises Mg 2+ , Ca 2+ , Zn 2+ , Mn 2+ , K + , Na +  or Al 3+ . 
     
     
         69 . The pharmaceutical composition according to  claim 68 , wherein said Mg 2+ , Ca 2+ , Zn 2+ , Mn 2+ , K + , Na +  or Al 2+  is provided as magnesium acetate, magnesium chloride, magnesium phosphate, magnesium sulfate, calcium acetate, calcium chloride, calcium phosphate, calcium sulfate, zinc acetate, zinc chloride, zinc phosphate, zinc sulfate, manganese acetate, manganese chloride, manganese phosphate, manganese sulfate, potassium acetate, potassium chloride, potassium phosphate, potassium sulfate, sodium acetate, sodium chloride, sodium phosphate, sodium sulfate, aluminum acetate, aluminum chloride, aluminum phosphate or aluminum sulfate. 
     
     
         70 . The pharmaceutical composition according to any one of  claims 45 - 69 , further comprising an antioxidant. 
     
     
         71 . The pharmaceutical composition according to  claim 70 , wherein said antioxidant is BHA, vitamin E or propyl gallate. 
     
     
         72 . The pharmaceutical composition according to any one of  claims 45 - 71 , further comprising a pharmaceutically acceptable binder or additive. 
     
     
         73 . The pharmaceutical composition according to  claim 72 , wherein the pharmaceutically acceptable binder or additive is selected from polyvinyl alcohol, polyvinylpyrrolidone (povidone), a starch, maltodextrin or a cellulose ether. 
     
     
         74 . The pharmaceutical composition according to  claim 73 , wherein the pharmaceutically acceptable binder or additive is polyvinyl alcohol. 
     
     
         75 . The pharmaceutical composition of  claim 73 , wherein the pharmaceutically acceptable binder or additive is a cellulose ether. 
     
     
         76 . The pharmaceutical composition of  claim 75 , wherein the cellulose ether is selected from: methylcellulose, ethylcellulose, carboxymethylcellulose, hydroxyethyl cellulose, hydroxyethyl methylcellulose, hydroxypropyl cellulose and hydroxypropyl methylcellulose. 
     
     
         77 . The pharmaceutical composition of any of  claims 45 - 76 , further comprising a pharmaceutically acceptable filler. 
     
     
         78 . The pharmaceutical composition according to  claim 77 , wherein the pharmaceutically acceptable filler is cellulose, isomalt, mannitol or dibasic calcium phosphate. 
     
     
         79 . The pharmaceutical composition of  claim 78 , wherein the cellulose is selected from microfine cellulose and microcrystalline cellulose. 
     
     
         80 . The pharmaceutical composition according to any one of  claims 45 - 79 , further comprising an additional therapeutic agent. 
     
     
         81 . The pharmaceutical composition according to  claim 80 , wherein said additional therapeutic agent is selected from one or more of an analgesic agent, an antidepressant, a promotility or prokinetic agent, an antiemetic, an antibiotic, a proton pump inhibitor, an acid blocker, a PDE5 inhibitor, an acid pump antagonist, a GABA-B agonist, a bile acid sequestrant or a mucosal protecting agent. 
     
     
         82 . A dosage unit comprising a pharmaceutical composition according to any one of  claims 45 - 81 . 
     
     
         83 . The dosage unit according to  claim 82 , wherein said dosage unit is a capsule or tablet. 
     
     
         84 . The dosage unit according to  claim 83 , wherein each of said dosage units comprises 5 μg to 1 mg of said peptide. 
     
     
         85 . A method for treating a gastrointestinal disorder comprising administering the pharmaceutical composition according to any one of  claims 45 - 81 . 
     
     
         86 . The method of  claim 85 , wherein the gastrointestinal disorder is selected from the group consisting of: irritable bowel syndrome (IBS), constipation, a functional gastrointestinal disorder, gastroesophageal reflux disease, functional heartburn, dyspepsia, visceral pain, gastroparesis, chronic intestinal pseudo-obstruction, colonic pseudo-obstruction, Crohn's disease, ulcerative colitis, and inflammatory bowel disease. 
     
     
         87 . The method of  claim 86 , wherein the gastrointestinal disorder is constipation. 
     
     
         88 . The method of  claim 87 , wherein the constipation is chronic constipation, idiopathic constipation, due to post-operative ileus, or caused by opiate use. 
     
     
         89 . The method of  claim 86 , wherein the gastrointestinal disorder is irritable bowel syndrome (IBS). 
     
     
         90 . The method of  claim 89 , wherein the irritable bowel syndrome is constipation-predominant irritable bowel syndrome (c-IBS), diarrhea-predominant irritable bowel syndrome (d-IBS) or alternating between the two irritable bowel syndromes (a-IBS). 
     
     
         91 . The method of  claim 86 , wherein the gastrointestinal disorder is dyspepsia. 
     
     
         92 . The method of  claim 86 , wherein the gastrointestinal disorder is gastroparesis. 
     
     
         93 . The method according to  claim 92 , wherein said gastroparesis is idiopathic, diabetic or post-surgical gastroparesis. 
     
     
         94 . The method of  claim 86 , wherein the gastrointestinal disorder is chronic intestinal pseudo obstruction. 
     
     
         95 . The method of  claim 86 , wherein the gastrointestinal disorder is Crohn's disease. 
     
     
         96 . The method of  claim 86 , wherein the gastrointestinal disorder is ulcerative colitis. 
     
     
         97 . The method of  claim 86 , wherein the gastrointestinal disorder is inflammatory bowel disease. 
     
     
         98 . The method of  claim 86 , wherein the gastrointestinal disorder is visceral pain. 
     
     
         99 . A method for increasing intestinal motility in a patient, the method comprising administering to the patient an effective amount of the pharmaceutical composition according to any one of  claims 45 - 81 . 
     
     
         100 . A method of increasing guanylate cyclase C (GC-C) receptor activity in a biological sample or organism, comprising contacting said biological sample or organism with a peptide according to any one of  claims 1 - 44 .

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