Optimized crosslinkers for trapping a target on a substrate

Abstract

The presently-disclosed subject matter relates to crosslinkers, compositions, and methods for trapping a target of interest on a substrate of interest. The methods may be used to inhibit and treat pathogen infection and provide contraception. The methods may be used to trap or separate particles and other substances. The subject matter further relates to methods of identifying and preparing optimal crosslinkers and methods for manipulating targets of interest.

1 - 20 . (canceled) 
     
     
         21 . A method for preventing or treating a bacterial infection on a mucosa in a subject, wherein the infection is caused by a bacteria, said method comprising: administering to the subject in need thereof an effective amount of a population of an antibody against the bacteria, wherein the antibody in the population has been selected so that the antibody associates with the mucins between 20% to less than 95% of the time, has a rate of binding to the bacteria greater than about 1×10 4  M −1 s −1 , and has a diffusion coefficient between 20% to 99% less compared to the diffusion coefficient of the antibody in water. 
     
     
         22 . The method of  claim 21 , wherein the antibody has been selected so that the antibody in the population associates with the mucins about 75% of the time and has a diffusion coefficient about 75% less compared to the diffusion coefficient of the antibody in water. 
     
     
         23 . The method of  claim 21 , wherein the mucosa is selected from an oral mucosa, a nasal mucosa, a lung mucosa, a genital mucosa, uterine mucosa, a vaginal mucosa, an ocular mucosa, and a gastrointestinal mucosa. 
     
     
         24 . The method of  claim 21 , wherein the administering comprises topically administering the antibody to the mucosa of the subject. 
     
     
         25 . The method of claim  1 , wherein the antibody is formulated into a composition suitable for intranasal, oral, intravaginal, by inhalation, or topical administration to a mucosal surface. 
     
     
         26 . The method of  claim 21 , wherein the composition further comprises a second antibody. 
     
     
         27 . The method of  claim 21 , wherein the antibody in the population has been selected so that the antibody has a trapping potency at a sub-neutralization dose. 
     
     
         28 . The method of  claim 21 , wherein the bacteria is selected from the group including one or more of:  Neisseria gonorrhoeae  (gonorrhea);  Chlamydia trachomatis  ( chlamydia , lymphogranuloma venereum);  Treponema pallidum  (syphilis);  Haemophilus ducreyi  (chancroid);  Klebsiella granulomatis  or  Calymmatobacterium granulomatis  (donovanosis),  Mycoplasma genitalium, Ureaplasma urealyticum  (mycoplasmas),  Salmonella , and  Escherichia coli.    
     
     
         29 . A method for preventing or treating an infection on a mucosa in a subject, wherein the infection is caused by a bacteria, said method comprising: administering to the subject in need thereof an effective amount of a population of an IgM antibody against the bacteria, wherein the IgM antibody in the population has been selected so that the antibody is specific to the bacteria and associates with the mucins between 30% to 85% of the time, has a rate of binding to the bacteria of greater than about 1×10 4  M −1 s −1 , and has a diffusion coefficient between 30% to 85% less compared to the diffusion coefficient of the antibody in water. 
     
     
         30 . The method of  claim 29 , wherein the antibody has been selected so that the antibody in the population associates with the mucins about 75% of the time and has a diffusion coefficient about 75% less compared to the diffusion coefficient of the antibody in water. 
     
     
         31 . The method of  claim 29 , wherein the mucosa is selected from an oral mucosa, a nasal mucosa, a lung mucosa, a genital mucosa, uterine mucosa, a vaginal mucosa, an ocular mucosa, and a gastrointestinal mucosa. 
     
     
         32 . The method of  claim 29 , wherein the administering comprises topically administering the antibody to the mucosa of the subject. 
     
     
         33 . The method of  claim 29 , wherein the antibody is formulated into a composition suitable for intranasal, oral, intravaginal, by inhalation, or topical administration to a mucosal surface. 
     
     
         34 . The method of  claim 29 , wherein the composition further comprises a second antibody. 
     
     
         35 . The method of  claim 29 , wherein the bacteria is selected from the group including one or more of:  Neisseria gonorrhoeae  (gonorrhea);  Chlamydia trachomatis  ( chlamydia , lymphogranuloma venereum);  Treponema pallidum  (syphilis);  Haemophilus ducreyi  (chancroid);  Klebsiella granulomatis  or  Calymmatobacterium granulomatis  (donovanosis),  Mycoplasma genitalium, Ureaplasma urealyticum  (mycoplasmas),  Salmonella , and  Escherichia coli.    
     
     
         36 . A method for preventing or treating a bacterial infection on a mucosa in a subject, wherein the infection is caused by a bacteria having a mobility of greater than 0.1 μm 2 /s, said method comprising: administering to the subject in need thereof an effective amount of a population of an antibody that specifically binds the bacteria, wherein the antibody has been selected so that the antibody associates with the mucins between 20% to less than 95% of the time, has a rate of binding to the bacteria greater than about 1×10 4  M −1 s −1 , and has a diffusion coefficient between 20% to 99% less compared to the diffusion coefficient of the antibody in water. 
     
     
         37 . The method of  claim 36 , wherein the bacteria comprises one or more of:  Neisseria gonorrhoeae  (gonorrhea);  Chlamydia trachomatis  ( chlamydia , lymphogranuloma venereum);  Treponema pallidum  (syphilis);  Haemophilus ducreyi  (chancroid);  Klebsiella granulomatis  or  Calymmatobacterium granulomatis  (donovanosis),  Mycoplasma genitalium, Ureaplasma urealyticum  (mycoplasmas),  Salmonella , and  Escherichia coli.