Systems, methods, and kits for diagnostics and treatment of viral respiratory infection

Abstract

Systems, methods, and kits for treating, preventing, and diagnosing viral infection using an androgen mediated pathway are described. Additionally, methods and kits for guiding treatment of viral respiratory disease are described by a method for testing for polymorphisms in the androgen receptor gene. Further, systems and methods for treatment of viral respiratory disease with various anti-androgens is detailed. Finally, systems, methods, and kits for treating, preventing, and diagnosing SARS-CoV-2 (COVID-19) are presented.

1 - 7 . (canceled) 
     
     
         8 . A method of treating a patient having or suspected of having a viral respiratory infection, the method comprising:
 administering a composition to the patient, the composition including any one or combination of:
 an androgen receptor antagonists or anti-androgen; 
 an androgen synthesis inhibitor; 
 an agent that counters the effect of androgens; 
 a globulin (SHBG) stimulator; 
 an antigonadotropins; 
 a mineralocorticoid to suppress androgen production in the adrenal gland; 
 a glucocorticoid to suppress androgen production in the adrenal gland; 
 an insulin sensitizing medication; and 
 vaccine or an immunogen against androstenedione that reduces the level of testosterone or increases estrogen. 
   
     
     
         9 . The method of  claim 8 , wherein:
 the anti-androgen is any one or combination of: cyproterone acetate, megestrol acetate, chlormadinone acetate, spironolactone, medrogestone, oxendolone, osaterone, bifluranol, finasteride, dutasteride, flutamide, bicalutamide, nilutamide, topilutamide, enzalutamide, apalutamide, dienogest, drospirenone, medrogestone, nomegestrol acetate, promegestone, trimegestone, ketoconazole, abiraterone acetate, seviteronel, aminoglutethimide, epristeride, alfaestradiol, isotretinoin, saw palmetto, darolutamide, galeterone, proxalutamide, triptorelin pamoate, allylestrenol, chlormadinone acetate or degarelix;   the agent that counters the effect of androgens is a sex hormone-binding globulin (SHBG) stimulator;   the glucocorticoid is anticorticotropin; and   the insulin sensitizing medication is metformin.   
     
     
         10 . The method of  claim 8 , wherein the administration of the composition involves any one or combination of topical application to the skin, nasal application, sub-lingual application, oral application, via injection, via inhalation, or ocular application. 
     
     
         11 . The method of  claim 8 , wherein the viral respiratory infection is any one or combination of coronavirus, influenza, influenza A, influenza B, SARS-CoV-1, SARS-CoV-2, MERS-CoV or rhinoviruses. 
     
     
         12 . The method of  claim 8 , wherein the composition is used as a treatment for the viral respiratory infection, a therapy for the viral respiratory infection, a prophylactic for the viral respiratory infection, and/or a preventive measure for contracting the viral respiratory infection. 
     
     
         13 . The method of  claim 8 , wherein the treatment involves administering the composition as a treatment for the viral respiratory infection and/or a prophylactic for the viral respiratory infection before, during, and/or after the patient is first diagnosed with the viral respiratory infection and/or before, during, and/or after the patient is hospitalized due to the viral respiratory infection. 
     
     
         14 . The method of  claim 12 , wherein the composition is further used as a treatment for prostate cancer, castration-resistant prostate cancer, metastatic castration-sensitive prostate cancer, non-metastatic castration-resistant prostate cancer and/or benign prostatic hyperplasia. 
     
     
         15 . The method of  claim 8 , further comprising predicting anti-androgen treatment response via evaluation of genetic variation in the gene and/or promotor region of the androgen receptor (AR). 
     
     
         16 . The method of  claim 15 , further comprising guiding selection of anti-androgen treatment and/or dosage selection of the selected anti-androgen treatment based on the predicted anti-androgen treatment response. 
     
     
         17 . The method of  claim 15 , wherein predicting the anti-androgen treatment response involves measuring polymorphisms in the AR gene. 
     
     
         18 . The method of  claim 15 , wherein:
 the number of cytosine-adenine-guanine (CAG) repeats in the first exon of the AR gene, the number of guanine-guanine-(any nucleotide) (GGN) repeats in the first exon in the AR gene, and/or a ratio of CAG/GGN repeats is used as the genetic variant; and   a cut off value for the number of CAG repeats the first exon of AR gene is used to define a person with androgen sensitivity.   
     
     
         19 . The method of  claim 18 , wherein the cut-off value for the number of CAG repeats the first exon of AR gene is between 10 and 30. 
     
     
         20 . The method of  claim 15 , wherein variants in the promoter region of the AR are used as the genetic variant. 
     
     
         21 . The method of  claim 8 , wherein the anti-androgen is combined with any one or combination of an anti-inflammatory agent, an anti-bacterial agent, or aspartame. 
     
     
         22 . The method of  claim 21 , wherein the viral respiratory infection is SARS-CoV-2. 
     
     
         23 . The method of  claim 8 , wherein administering the composition involves administering:
 topical skin application of finasteride at 1-30% (w/w), oral finasteride at 0.01-30 mg, dutasteride at 0.1 mg/day to 3.0 mg/day, degarelix at 24 mg-720 mg, oral flutamide at 75-2,250 mg/day, enzalutamide at 16-480 mg qd, oral dutasteride at 0.025-0.75 mg/day, apalutamide at 6-180 mg 4 times per day, injection of 30-900 mg of cyproterone acetate, subcutaneous injection of 12-360 mg of degarelix, bicalutamide at 5-150 mg per day, subcutaneous injection of 12-360 mg of degarelix, oral darolutamide at 30-900 mg twice daily, abiraterone at 50-1500 mg twice daily, oral nilutamide at 30-900 mg once daily, or docetaxel at 7.5-225 mg/m 2  IV over 1 hour.   
     
     
         24 . The method of  claim 8 , wherein administering the composition involves administering:
 topical skin application of finasteride at 1-10% (w/w), oral finasteride at 0.1-10 mg, dutasteride at 0.1 mg/day to 1.0 mg/day, degarelix at 24 mg-240 mg, oral flutamide at 75-750 mg/day, enzalutamide at 16-160 mg qd, oral dutasteride at 0.025-0.25 mg/day, apalutamide at 6-60 mg 4 times per day, injection of 30-300 mg of cyproterone acetate, subcutaneous injection of 12-120 mg of degarelix, bicalutamide at 5-50 mg per day, subcutaneous injection of 12-120 mg of degarelix, oral darolutamide at 30-300 mg twice daily, abiraterone at 50-500 mg twice daily, oral nilutamide at 30-300 mg once daily, or docetaxel at 7.5-750 mg/m 2  IV over 1 hour.   
     
     
         25 . A method of treating a patient having or suspected of having a viral respiratory infection, the method comprising:
 determining the risk of severity or mortality of the viral respiratory infection for the patient by identifying and measuring genetic variation in the gene and/or promotor region of any one or combination of the androgen receptor (AR), TMPRSS2, furin, or ACE2; and   selecting a composition and a dosage for the composition based on the determined risk of severity or mortality;   administering the composition to the patient, the composition including any one or combination of:
 an androgen receptor antagonists or anti-androgen; 
 an androgen synthesis inhibitor; 
 an agent that counters the effect of androgens; 
 a globulin (SHBG) stimulator; 
 an antigonadotropin; 
 a mineralocorticoid to suppress androgen production in the adrenal gland; 
 a glucocorticoid to suppress androgen production in the adrenal gland; 
 an insulin sensitizing medication; and 
 vaccine or an immunogen against androstenedione that reduces the level of testosterone or increases estrogen. 
   
     
     
         26 . The method of  claim 25 , wherein the method involves use of a kit, wherein:
 a genetic sample via buccal swab, saliva sample, blood sample, tissue sample, and/or hair sample is obtained via a deoxyribonucleic acid (DNA) sample collection unit;   polymorphisms in the androgen receptor gene are identified via a viral respiratory infection sensitivity unit; and   an assay analysis is performed using a DNA diagnostic assay.   
     
     
         27 . The method of  claim 25 , further comprising:
 predicting anti-androgen treatment response via evaluation of a genetic variation in the gene and/or promotor region in any one or combination of AR, TMPRSS2, furin, or ACE2.   
     
     
         28 . The method of  claim 27 , wherein the genetic variation includes any one or combination of:
 one or more of: F877L/T878A, F877L, T878A, rs137852591, rs104894742, rs1057518177, rs1057521121, rs1057521122, rs1057523747, rs1064793480, rs1064793645, rs1064794065, rs1064794069, rs1064795250, rs1085307685, rs1085307962, rs12014709, rs1204038, rs1337080, rs137852562, rs137852563, rs137852564, rs137852565, rs137852566, rs137852567, rs137852568, rs137852569, rs137852570, rs137852571, rs137852572, rs137852573, rs137852574, rs137852575, rs137852576, rs137852577, rs137852578, rs137852579, rs137852580, rs137852581, rs137852582, rs137852583, rs137852584, rs137852585, rs137852586, rs137852587, rs137852588, rs137852589, rs137852590, rs137852592, rs137852593, rs137852594, rs137852595, rs137852596, rs137852597, rs137852598, rs137852599, rs137852600, rs137852601, rs1800053, rs201934623, rs2361634, rs5031002, rs5918757, rs6152, rs6624304, rs750324117, rs754201976, rs755226547, rs759327087, rs864622007, rs869320731, rs869320732, rs878853033, rs886039558, rs886041050, rs886041128, rs886041129, rs886041130, rs886041131, rs886041132, rs886041133, rs886041352, rs9332969, or rs9332971;   one or more of: rs12329760, rs2070788, rs383510, rs463727, rs34624090, rs55964536, rs734056, rs4290734, rs34783969, rs11702475, rs35899679, rs35041537, rs8134378, rs2070788, rs9974589, rs7364083, or rs2070788;   one or more of: rs2285666, G8790A, rs35803318, rs1978124, rs2048683, rs2074192, rs2106809, rs2285666, rs233575, rs4240157, rs4646155, rs4646156, rs4646174, rs4646176, rs4646188, rs6632677, rs714205, or rs879922; or   one or more of: rs17514846, rs2071410, rs4702, rs4932178, rs6226, or rs6227.