Separation devices, associated methods, and systems

Abstract

A system for isolating a target molecule from a bioprocess fluid includes a single-use disposable separation device having a plurality of perimeter-bonded layers defining one or more mesofluidic channels of the separation device, wherein each layer includes a biocompatible polymer material, wherein the separation device is configured to separate at least a portion of particles from the bioprocess fluid to generate a substantially clarified bioprocess fluid, and a chromatography system fluidically coupled at the outflow of the separation device in a configuration for further processing the clarified bioprocess fluid.

1 . A method for clarifying a bioprocess fluid comprising particles suspended in a cell culture fluid, the method comprising:
 flowing an unclarified bioprocess fluid from a bioreactor through a plurality of mesofluidic channels of a separation device comprising a fluid inlet and a fluid outlet to separate at least a portion of particles of the unclarified bioprocess fluid to generate a substantially clarified bioprocess fluid; and   collecting the clarified bioprocess fluid from the fluid outlet of the separation device;   wherein a residence time of the bioprocess fluid between the fluid inlet and fluid outlet of the separation device ranges from 10 minutes to 40 minutes, and wherein the separation device is operated at an angle less than 10° relative to a work surface.   
     
     
         2 . The method of  claim 1 , wherein the separation device is operated at an angle less than or equal to 5° relative to the work surface. 
     
     
         3 . The method of  claim 1 , wherein the separation device is operated at an angle of about 0° relative to the work surface. 
     
     
         4 . The method of  claim 1 , wherein the particles comprise cells, aggregated cells, adhered cells on carriers, diatomaceous earth, resin beads, or a combination thereof. 
     
     
         5 . The method of  claim 1 , wherein the substantially clarified bioprocess fluid comprises biotherapeutically active products, cells, proteins, viruses, vaccines, DNA, RNA, or a combination thereof. 
     
     
         6 . The method of  claim 1 , wherein a capacity of the separation device and a flow rate of the bioprocess fluid flowed through the plurality of mesofluidic channels is configured to process up to 10,000 liters of the bioprocess fluid within the residence time. 
     
     
         7 . The method of  claim 1 , wherein a capacity of the separation device and a flow rate of the bioprocess fluid flowed through the plurality of mesofluidic channels is configured to process up to 4,000 liters of the bioprocess fluid within the residence time. 
     
     
         8 . The method of  claim 1 , wherein a capacity of the separation device and a flow rate of the bioprocess fluid flowed through the plurality of mesofluidic channels is configured to process up to 2,000 liters of the bioprocess fluid within the residence time. 
     
     
         9 . The method of  claim 1 , additionally comprising recovering the separated particles from the plurality of mesofluidic channels of the separation device subsequent to collecting the clarified bioprocess fluid. 
     
     
         10 . The method of  claim 1 , additionally comprising adding a flocculant to the unclarified bioprocess fluid before flowing the unclarified bioprocess fluid through the separation device to aid in separation of the particles from the bioprocess fluid. 
     
     
         11 . The method of  claim 1 , additionally comprising:
 lowering the pH of the unclarified bioprocess fluid before flowing the unclarified bioprocess fluid through the separation device, and   raising the pH of the clarified bioprocess fluid to a neutral pH after collecting the unclarified bioprocess fluid from the separation device.   
     
     
         12 . The method of  claim 1 , additionally comprising flushing the separation device before a terminal capacity of the separation device is reached, wherein flushing the separation device comprises flowing a separate fluid through the separation device and removing the particles separated in the separation device. 
     
     
         13 . The method of  claim 1 , additionally comprising reversing a flow from the outlet of the separation device such that a separate fluid is flowed from the fluid outlet of the separation device to the fluid inlet of the separation device before a terminal capacity of the separation device is reached, and returning the separated particles to the bioreactor or a separate container. 
     
     
         14 . The method of  claim 1 , additionally comprising recovering the separated particles captured in the separation device. 
     
     
         15 . The method of  claim 1 , which is carried out in the system of any one of  claims 16 - 29 . 
     
     
         16 . A system for isolating a target molecule from a bioprocess fluid, the system comprising:
 a single-use disposable separation device comprising a plurality of perimeter-bonded layers defining one or more mesofluidic channels of the separation device, wherein each layer comprises a biocompatible polymer material, wherein the separation device is configured to separate at least a portion of particles from the bioprocess fluid to generate a substantially clarified bioprocess fluid; and   a secondary purification system fluidically coupled to and outlet of the separation device configured to further process the clarified bioprocess fluid.   
     
     
         17 . The system of  claim 16 , wherein the layers comprise a top layer, a bottom layer, and one or more intervening layers, and wherein the perimeter-bonded layers define the one or more mesofluidic channels in a stacked parallel configuration. 
     
     
         18 . The system of  claim 17 , wherein the separation device comprises a plurality of spacers disposed at ends of the layers, wherein the spacers of each intervening layer comprise a hole, wherein each of the top layer and the bottom layer comprise one spacer comprising a hole and one spacer not comprising a hole, and wherein the spacer of the top layer comprising the hole is disposed at an end of the device opposite the spacer of the bottom layer comprising the hole. 
     
     
         19 . The system of  claim 18 , wherein the separation device comprises a fluid inlet manifold and a fluid outlet manifold, wherein the fluid inlet and the fluid outlet are formed from the holes of the spacers, and wherein the one or more mesofluidic channels are fluidically coupled to and disposed between the fluid inlet manifold and the fluid outlet manifold. 
     
     
         20 . The system of  claim 19 , wherein each mesofluidic channel of the one or more mesofluidic channels of the separation device comprise a height within a range of 2 millimeters to 20 millimeters, and wherein the height of each mesofluidic channel is defined by the spacers. 
     
     
         21 . The system of  claim 19 , wherein each mesofluidic channel of the one or more mesofluidic channels of the separation device comprise a height within a range of 2 millimeters to 10 millimeters, such as 2 millimeters to 6 millimeters, and wherein the height of each mesofluidic channel is defined by the spacers. 
     
     
         22 . The system of  claim 16 , comprising a bioreactor fluidically coupled to an inlet of the separation device and configured to flow the bioprocess fluid to the separation device. 
     
     
         23 . The system of  claim 16 , wherein the separation device comprises a capacity of up to 2,000 L such that when the separation device is provided with the bioprocess fluid at a particular flow rate, a ratio of the capacity of the separation device to the flow rate of the provided bioprocess fluid is within a range of 10 minutes to 40 minutes. 
     
     
         24 . The system of  claim 16 , wherein the separation device comprises multiple separation devices connected in parallel and/or in series. 
     
     
         25 . The system of  claim 16 , wherein the separation device comprises multiple separation devices connected in parallel which are fluidically coupled to the bioreactor, and wherein the parallel separation devices are operated in an alternating arrangement such that the parallel separation devices can be alternately supplied with the bioprocess fluid. 
     
     
         26 . The system of  claim 16 , wherein a residence time of the bioprocess fluid within the separation device ranges from 10 minutes to 40 minutes. 
     
     
         27 . The system of  claim 16 , wherein the secondary purification system includes depth filtration, membrane filtration, chromatography, centrifugation, or any combination thereof. 
     
     
         28 . A system for isolating a target molecule from a bioprocess fluid, the system comprising:
 a bioreactor;   a separation device fluidically coupled to the bioreactor at an inlet of the separation device and configured to receive a flow of the bioprocess fluid from the bioreactor and to separate a least a portion of particles from the bioprocess fluid to generate a substantially clarified bioprocess fluid, wherein the separation device comprises a plurality of parallel mesofluidic channels for separation of the particles, and wherein the separation device is operated at an angle less than 10° relative to a work surface; and   one or more additional purification subsystems fluidically coupled to an outlet of the separation device and configured for further processing of the clarified bioprocess fluid, wherein the additional purification subsystems comprise chromatographic separation, secondary depth filtration, a polishing membrane, or any combination thereof.   
     
     
         29 . The system of  claim 28 , wherein the separation device is a configured to process the bioprocess fluid having a cell density of at least 1 million cells/mL. 
     
     
         30 . The system of  claim 28 , wherein a residence time of the bioprocess fluid within the separation device ranges from 16 minutes to 30 minutes.