Sample extraction and preparation device

Abstract

A fluid sample extraction device is disclosed comprising a housing defining an internal fluid passage having a distal open end and a proximal open end and a porous medium within the fluid passage, between the distal open end and proximal open end. The porous medium, which may be glass, is configured to allow fluid flow in the fluid passage to flow around the porous medium, toward the proximal open end of the housing, when fluid is drawn from the distal open end toward the proximal open end, and to allow fluid in the fluid passage to flow toward the distal open end of the housing, through the porous medium when the fluid is forced toward the distal open end. The porous medium is also configured to capture nucleic acids in the porous medium from the fluid when fluid is forced through the porous medium. Devices and kits are also disclosed.

What is claimed is: 
     
         1 - 30 . (canceled) 
     
     
         31 . A method for processing a fluid, comprising:
 (a) providing a fluid extraction device comprising a housing comprising a fluid passage and a porous medium in fluid communication with said fluid passage, wherein an outer portion of said porous medium is capable of deformation to provide a space;   (b) using said fluid extraction device to direct said fluid through said fluid passage to said porous medium, such that (i) said outer portion of said porous medium undergoes deformation to provide said space, and (ii) at least a first portion of said fluid flows around said porous medium; and   (c) subsequent to (b), directing at least a second portion of said fluid through said porous medium, wherein said porous medium removes a biological material from said at least said second portion of said fluid.   
     
     
         32 . The method of  claim 31 , wherein said fluid is directed into said fluid passage using a draw pressure, wherein said fluid is discharged from said fluid passage using a discharge pressure, and wherein said discharge pressure is greater than said draw pressure. 
     
     
         33 . The method of  claim 31 , wherein said porous medium comprises at least one material selected from the group consisting of glass, silica, borosilicate, a polymer, polyethylene, nylon, and Acrylonitrile-Butadiene-Styrene (ABS). 
     
     
         34 . The method of  claim 33 , wherein said porous medium comprises glass and polyethylene. 
     
     
         35 . The method of  claim 31 , wherein said porous medium comprises two or more portions. 
     
     
         36 . The method of  claim 36 , wherein said two or more portions of said porous medium comprises a first portion and a second portion, wherein said first portion comprises glass, and wherein said second portion comprises a polymer. 
     
     
         37 . The method of  claim 31 , further comprising repeating (b) and (c) for a given number of cycles thereby capturing a remainder of said nucleic acids from said fluid. 
     
     
         38 . The method of  claim 31 , further comprising:
 (d) directing a wash buffer into said fluid passage through said space adjacent to said porous medium; and   (e) discharging said wash buffer from said fluid passage through said porous medium, wherein upon discharging said fluid from said fluid passage, said porous medium captures nucleic acids from said fluid.   
     
     
         39 . The method of  claim 31 , further comprising eluting said nucleic acids from said porous medium. 
     
     
         40 . The method of  claim 39 , wherein said eluting is performed using an elution buffer selected from the group consisting of water, Tris-EDTA, or a combination thereof. 
     
     
         41 . The method of  claim 31 , wherein said porous medium has a porosity from about 0.2 microns to 3 microns. 
     
     
         42 . The method of  claim 31 , wherein said fluid extraction device further comprises a proximal fitting, a distal fitting, and a chamber therebetween, wherein said chamber is in fluid communication with said fluid passage, wherein said chamber comprises a proximal surface and a distal surface, and wherein said chamber comprises said porous medium. 
     
     
         43 . The method of  claim 42 , wherein at least one of said proximal surface and said distal surface comprises one or more grooves that distribute said fluid in said chamber upon flow of said fluid towards said chamber. 
     
     
         44 . The method of  claim 42 , wherein at least one of said proximal surface and said distal surface comprises one or more grooves that prevent said porous medium from blocking said fluid passage. 
     
     
         45 . The method of  claim 42 , wherein said chamber further comprises a lateral surface, wherein at least a portion of said lateral surface comprises a taper relative to a longitudinal axis of said fluid passage. 
     
     
         46 . The method of  claim 45 , wherein a distal end of said lateral surface comprises said taper. 
     
     
         47 . The method of  claim 45 , wherein a size of said space adjacent to said porous medium is based at least in part on an angle of said taper. 
     
     
         48 . The method of  claim 42 , wherein an axial cross-section of a distal portion of said chamber is substantially similar to an axial cross-section of said porous medium, and wherein during discharging said fluid, said porous medium is positioned such that said space adjacent to said porous medium is closed and said fluid passes through said porous medium. 
     
     
         49 . The method of  claim 31 , wherein said fluid is directed into said fluid passage using a draw pressure, which draw pressure is applied using a syringe. 
     
     
         50 . A method for processing a fluid, comprising:
 (a) providing a fluid extraction device comprising a housing comprising a fluid passage and chamber, wherein said chamber comprises (i) a porous medium in fluid communication with said fluid passage and (ii) a space between an outer portion of said porous medium and an internal wall of said chamber;   (b) using said fluid extraction device to direct said fluid through said fluid passage to said chamber, such that at least a first portion of said fluid flows through said space; and   (c) subsequent to (b), discharging at least a second portion of said fluid through said porous medium, which porous medium removes a biological material from said at least said second portion of said fluid.