Cation exchange chromatography wash buffer

Abstract

A wash buffer comprising a surfactant for use in affinity and cation exchange chromatography to purify proteins of interest from protein aggregates and to remove and/or inactivate viruses. When used during affinity or cation exchange chromatography for the purification of a protein of interest, such as an antibody, the wash buffer significantly improves viral clearance from the preparation, while also reducing the levels of host cell proteins and protein aggregates. Following affinity or cation exchange chromatography with the wash buffer, the protein of interest may be further purified using other chromatography and filtration operations.

1 . A method of purifying a protein of interest bound to a cation exchange (CEX) chromatography support comprising applying a wash solution comprising one or more surfactants to the CEX chromatography support, wherein the wash solution clears retroviral like particles (RVLP) to below detection levels as measured by a log reduction value (LRV) and clears host cell proteins (HCP). 
     
     
         2 . The method of  claim 1 , further comprising loading a mixture comprising the protein of interest and one or more contaminant proteins, aggregates, and/or viruses onto the CEX chromatography support before applying the wash solution to the CEX chromatography support, and then eluting the protein of interest from the CEX chromatography support after applying the wash solution to the CEX chromatography support, thereby forming a purified eluate of the protein of interest. 
     
     
         3 - 4 . (canceled) 
     
     
         5 . The method of  claim 2 , wherein one or more surfactants comprises Lauryldimethylamine N-oxide (LDAO), Triton 100, nonyl phenoxypolyethoxylethanol (NP40), Sulfobetaine-12 (SB-12), Sulfobetaine-14 (SB-14), polysorbate 20 (PS 20), polysorbate 80 (PS 80), or a combination thereof. 
     
     
         6 . The method of  claim 2 , wherein one or more surfactants comprises a zwitterionic surfactant, a quaternary ammonium salt, an alkylphenol ethoxylate, an ethoxylate, an alkyl polyglucoside, an amino oxide, a phosphine oxide, a non-ionic surfactant, or an anionic surfactant. 
     
     
         7 .- 17 . (canceled) 
     
     
         18 . The method of  claim 2 , wherein the wash solution comprises about 0.01% to about 1% w/v of the one or more surfactants. 
     
     
         19 .- 22 . (canceled) 
     
     
         23 . The method of  claim 2 , wherein the CEX chromatography support is a sepharose matrix resin. 
     
     
         24 . The method of  claim 2 , wherein the CEX chromatography support is a synthetic polymer matrix resin or wherein the CEX chromatography support is not a hydrophobic resin. 
     
     
         25 .- 26 . (canceled) 
     
     
         27 . The method of  claim 2 , further comprising applying a subsequent wash solution to the CEX chromatography support before eluting the protein of interest from the CEX chromatography support. 
     
     
         28 .- 31 . (canceled) 
     
     
         32 . The method of  claim 2 , wherein the mixture comprising a protein of interest and one or more contaminant proteins, aggregates, and/or viruses is a harvest cell culture fluid (HCCF). 
     
     
         33 . The method of  claim 2 , wherein the method does not comprise protein A purification. 
     
     
         34 . (canceled) 
     
     
         35 . The method of  claim 2 , wherein the mixture comprising a protein of interest and one or more contaminant proteins, aggregates, and/or viruses is an eluate of a protein A chromatography step. 
     
     
         36 .- 40 . (canceled) 
     
     
         41 . The method of  claim 1 , comprising:
 a) loading a mixture comprising a protein of interest and one or more contaminants, aggregates and/or viruses onto a protein A chromatography support,   b) washing the protein A chromatography support with a protein A chromatography wash solution comprising one or more surfactants to remove the one or more contaminant proteins, aggregates and/or viruses from the protein A chromatography support,   c) eluting the protein of interest from the protein A chromatography support and   d) loading the eluate comprising the protein of interest onto the cation exchange (CEX) chromatography support,   before applying the wash solution comprising one or more surfactants to the CEX chromatography support;   wherein the wash solution removes the one or more contaminant proteins, aggregates and/or viruses from the CEX chromatography support, and   then eluting the protein of interest from the CEX chromatography support after applying the wash solution to the CEX chromatography support, thereby forming a purified eluate of the protein of interest.   
     
     
         42 . The method of  claim 2 , wherein the contaminant proteins are host cell proteins. 
     
     
         43 .- 45 . (canceled) 
     
     
         46 . The method of  claim 1 , wherein the LRV is between about 1.0 and about 10.0 log 10. 
     
     
         47 .- 52 . (canceled) 
     
     
         53 . The method of  claim 1 , wherein the LRV is measured by quantitative PCR or using an infectivity assay. 
     
     
         54 . (canceled) 
     
     
         55 . The method of  claim 1 , wherein the LRV is achieved by applying 1 column volume (CV), 2 CVs, 3 CVs, 4 CVs, or 5 CVs of the wash. 
     
     
         56 .- 62 . (canceled) 
     
     
         63 . The method of  claim 2 , wherein the method does not comprise an anion exchange chromatography step. 
     
     
         64 . The method of  claim 2 , further comprising subjecting the eluate to a viral inactivation step or further comprising filtering the purified eluate of the protein of interest to remove viruses. 
     
     
         65 .- 68 . (canceled) 
     
     
         69 . The method of  claim 2 , further comprising formulating the purified eluate of the protein of interest as a composition including a pharmaceutically acceptable excipient. 
     
     
         70 . (canceled) 
     
     
         71 . (canceled) 
     
     
         72 . The method of  claim 2 , wherein the protein of interest comprises an antibody or antigen binding fragment thereof, or fusion protein construct thereof. 
     
     
         73 .- 88 . (canceled) 
     
     
         89 . The method of  claim 2 , wherein the CEX chromatography wash solution further comprises arginine, histidine, sodium chloride, sodium phosphate, or sodium acetate. 
     
     
         90 .- 97 . (canceled) 
     
     
         98 . The method of  claim 2 , wherein the CEX chromatography wash solution comprises a pH of about 5.0 to 7.0. 
     
     
         99 . (canceled) 
     
     
         100 . A preparation of a protein of interest produced by the method of  claim 1 . 
     
     
         101 .- 103 . (canceled) 
     
     
         104 . A composition comprising a preparation of a protein of interest produced by the method of  claim 1  and a pharmaceutically acceptable excipient. 
     
     
         105 . A composition comprising a virus-inactivated preparation of a protein of interest and a pharmaceutically acceptable excipient, produced by the method of  claim 1 . 
     
     
         106 . A composition comprising an aqueous carrier and a recombinantly-expressed or hybridoma-expressed antibody or antigen-biding fragment thereof, wherein the composition is substantially free of viral particles, and wherein the antibody or antigen-binding fragment thereof (a) specifically binds to TNF-like ligand 1A (TL1a) and comprises one or more complementary determining regions (CDRs) of a VH comprising the amino acid sequence of SEQ ID NO: 5 or SEQ ID NO: 6 and one or more CDRs of a VL comprising the amino acid sequence of SEQ ID NO: 7, (b) specifically binds to calcitonin gene-related peptide (CGRP) and comprises one or more CDRs of a VH comprising the amino acid sequence of SEQ ID NO: 1 and one or more CDRs of a VL comprising the amino acid sequence of SEQ ID NO: 2, or (c) specifically binds to CD38, comprising one or more CDRs of a VH comprising the amino acid sequence of SEQ ID NO: 3 and one or more CDRs of a VL comprising the amino acid sequence of SEQ ID NO: 4. 
     
     
         107 .- 108 . (canceled) 
     
     
         109 . A composition comprising an aqueous carrier and a recombinantly-expressed or hybridoma-expressed antibody prepared by a method comprising:
 a) loading a mixture comprising said antibody and one or more contaminants, aggregates and/or viruses onto a protein A chromatography support,   b) eluting the antibody from the protein A chromatography support,   c) loading the eluate from step b) onto a cation exchange (CEX) chromatography support,   d) washing the CEX chromatography support with a CEX chromatography wash solution comprising one or more surfactants to remove the one or more contaminant proteins, aggregates and/or viruses from the support, and   e) eluting the antibody from the CEX chromatography support, thereby forming a purified eluate of the antibody.   
     
     
         110 .- 113 . (canceled)