Ror1 antibodies

Abstract

There is described Receptor Tyrosine Kinase Like Orphan Receptor 1 (ROR1) antibodies that specifically bind a ROR1 polypeptide, and their use. In particular, isolated monoclonal antibodies are described and their use in a number of applications, including in the detection, prevention and treatment of cancer.

1 - 46 . (canceled) 
     
     
         47 . An isolated single chain Fv protein (scFv) comprising a light chain variable domain and a heavy chain variable domain wherein the light chain variable domain comprises a light chain complementarity determining region (LCDR)1, an LCDR2 and an LCDR3, and wherein the heavy chain variable domain comprises a heavy chain complementarity determining region (HCDR)1, an HCDR2 and an HCDR3,
 wherein LCDR1 comprises an amino acid sequence set forth in SEQ ID NO: 24; LCDR2 comprises an amino acid sequence set forth in SEQ ID NO: 26; and LCDR3 comprises an amino acid sequence set forth in SEQ ID NO: 28; HCDR1 comprises an amino acid sequence set forth in SEQ ID NO: 115; HCDR2 comprises an amino acid sequence set forth in SEQ ID NO: 117;   and HCDR3 comprises an amino acid sequences set forth in SEQ ID NO: 252, or wherein the LCDR1 comprises the amino acid sequence set forth as SEQ ID NO: 272, the LCDR2 comprises the amino acid sequence set forth as SEQ ID NO: 273, the LCDR3 comprises the amino acid sequence set forth as SEQ ID NO: 28, the HCDR1 comprises the amino acid sequence set forth as SEQ ID NO: 274, the HCDR2 comprises the amino acid sequence set forth as SEQ ID NO: 275, and the HCDR3 comprises the amino acid sequence set forth as SEQ ID NO: 276;   and wherein the scFv specifically binds to a ROR1 polypeptide.   
     
     
         48 . An isolated scFv according to  claim 47 , wherein when HCDR3 comprises an amino acid sequence having the sequence set forth as SEQ ID NO: 252, or the HCDR3 comprises an amino acid sequence as set forth in SEQ ID NO: 119, 249, 250 or 251. 
     
     
         49 . An isolated scFv according to  claim 47 , wherein:
 (a) the light chain variable domain comprises a Light Chain Framework Region (LCFR)1 comprising the amino acid sequence as set forth as one of SEQ ID NO: 23, SEQ ID NO: 230, SEQ ID NO: 238 or SEQ ID NO: 239; an LCFR2 comprising the amino acid sequence as set forth as one of SEQ ID NO: 25, SEQ ID NO: 231, SEQ ID NO: 233 or SEQ ID NO: 236; an LCFR3 comprising the amino acid sequence as set forth as one of SEQ ID NO: 27, SEQ ID NO: 232, SEQ ID NO: 234, SEQ ID NO: 237 or SEQ ID NO: 240; and an LCFR4 comprising the amino acid sequence as set forth as one of SEQ ID NO: 14, SEQ ID NO: 205 or SEQ ID NO: 234, wherein the Light Chain Framework Regions may include up to 10 amino acid substitutions in the amino acid sequences as set forth above, or   (b) the heavy chain variable domain comprises a Heavy Chain Framework Region (HCFR)1 comprising the amino acid sequence as set forth as one of SEQ ID NO: 114, SEQ ID NO: 215, SEQ ID NO: 218 or SEQ ID NO: 223; an HCFR2 comprising the amino acid sequence as set forth as one of SEQ ID NO: 116, SEQ ID NO: 216, SEQ ID NO: 219 or SEQ ID NO: 221; an HCFR3 comprising the amino acid sequence as set forth as one of SEQ ID NO: 118, SEQ ID NO: 217, SEQ ID NO: 220, SEQ ID NO: 222 or SEQ ID NO: 224; and an HCFR4 comprising the amino acid sequence as set forth as one of SEQ ID NO: 94, SEQ ID NO: 186 or SEQ ID NO: 108, wherein the Heavy Chain Framework Regions may include up to 10 amino acid substitutions in the amino acid sequences as set forth above.   
     
     
         50 . An isolated scFv according to  claim 47 , wherein:
 (a) the light chain variable domain comprises the amino acid sequence as set forth as one of SEQ ID NO: 79, SEQ ID NO: 241, SEQ ID NO: 242, SEQ ID NO: 243, SEQ ID NO: 244 or SEQ ID NO: 245, or an amino acid sequence having at least 90% identity to the specified amino acid sequences; or   (b) the heavy chain variable domain comprises the amino acid sequence as set forth as one of SEQ ID NO: 172, SEQ ID NO: 225, SEQ ID NO: 226, SEQ ID NO: 227, SEQ ID NO: 228 or SEQ ID NO: 229, or an amino acid sequence having at least 90% identity to the specified amino acid sequences.   
     
     
         51 . An isolated scFv comprising a light chain variable domain and a heavy chain variable domain wherein:
 (a) the light chain variable domain comprises the amino acid sequence as set forth as SEQ ID NO: 79 and the heavy chain variable domain comprises the amino acid sequence as set forth as SEQ ID NO: 172;   (b) the light chain variable domain comprises the amino acid sequence as set forth as SEQ ID NO: 241 and the heavy chain variable domain comprises the amino acid sequence as set forth as SEQ ID NO: 225;   (c) the light chain variable domain comprises the amino acid sequence as set forth as SEQ ID NO: 242 and the heavy chain variable domain comprises the amino acid sequence as set forth as SEQ ID NO: 226;   (d) the light chain variable domain comprises the amino acid sequence as set forth as SEQ ID NO: 243 and the heavy chain variable domain comprises the amino acid sequence as set forth as SEQ ID NO: 227;   (e) the light chain variable domain comprises the amino acid sequence as set forth as SEQ ID NO: 244 and the heavy chain variable domain comprises the amino acid sequence as set forth as SEQ ID NO: 228; or   (f) the light chain variable domain comprises the amino acid sequence as set forth as SEQ ID NO: 245 and the heavy chain variable domain comprises the amino acid sequence as set forth as SEQ ID NO: 229.   
     
     
         52 . The isolated scFv of  claim 47  or  claim 51 , wherein:
 (a) the scFv is a humanized scFv; 
 (b) the scFv binds to an epitope of ROR1, wherein the epitope comprises amino acid Gln-261; 
 (c) the scFv is labeled; or 
 (d) the scFv is labeled, wherein the label is a fluorescent, an enzymatic, or a radioactive label. 
 
     
     
         53 . An isolated scFv fragment of the isolated scFv of  claim 47  or  claim 51 . 
     
     
         54 . The isolated scFv fragment of  claim 53 , wherein:
 (a) the scFv fragment is labeled; or   (b) the scFv fragment is labeled, wherein the label is a fluorescent, an enzymatic, or a radioactive label.   
     
     
         55 . The isolated scFv of  claim 47  or  claim 51 , wherein:
 (a) the isolated scFv or isolated scFv fragment is included in a bispecific antibody; or 
 (b) the isolated scFv or isolated scFv fragment is included in a chimeric antigen receptor (CAR). 
 
     
     
         56 . A composition comprising the scFv of  claim 47  or  claim 51 , or an scFv fragment thereof, and a pharmaceutically acceptable carrier. 
     
     
         57 . An isolated nucleic acid encoding the scFv of  claim 47  or  claim 51 , or an scFv fragment thereof. 
     
     
         58 . An isolated host cell transformed with a nucleic acid encoding the scFv of  claim 47  or  claim 51 , or an scFv fragment thereof. 
     
     
         59 . A method of detecting cancer in a subject comprising:
 contacting a biological sample from the subject with at least one isolated scFv of  claim 47  or  claim 51 , or an scFv fragment thereof; and   detecting scFv bound to the sample,   
       wherein the presence of scFv bound to the sample indicates that the subject has cancer. 
     
     
         60 . The method of detecting cancer of  claim 59 , wherein:
 (a) the scFv specifically binds a ROR1 polypeptide, and wherein the presence of scFv bound to the sample indicates that the subject has leukemia, pancreatic cancer, prostate cancer, colon cancer, bladder cancer, ovarian cancer, glioblastoma, testicular cancer, uterine cancer, adrenal cancer, breast cancer, lung cancer, melanoma, neuroblastoma, sarcoma or renal cancer;   (b) the isolated scFv is directly labeled; or   (c) the method further comprises:   
       contacting the sample with a second antibody that specifically binds the isolated scFv; and 
       detecting the binding of the second antibody, 
       wherein an increase in binding of the second antibody to the sample as compared to binding of the second antibody to a control sample detects the presence of cancer in the subject. 
     
     
         61 . The method of detecting cancer of  claim 60 , wherein the leukemia is Chronic Lymphocytic Leukaemia (CLL), Acute Lymphoblastic Leukaemia (ALL), Mantle Cell Leukaemia or Hairy Cell Leukaemia. 
     
     
         62 . A method of treating cancer in a subject, comprising administering to the subject a therapeutically effective amount of at least one scFv of  claim 47  or  claim 51 , or an scFv fragment thereof, thereby treating cancer. 
     
     
         63 . The method of treating cancer of  claim 62 , wherein the cancer is leukemia, pancreatic cancer, prostate cancer, colon cancer, bladder cancer, ovarian cancer, glioblastoma, testicular cancer, uterine cancer, adrenal cancer, breast cancer, lung cancer, melanoma, neuroblastoma, sarcoma or renal cancer. 
     
     
         64 . The method of treating cancer of  claim 63 , wherein the leukemia is Chronic Lymphocytic Leukaemia (CLL), Acute Lymphoblastic Leukaemia (ALL), Mantle Cell Leukaemia or Hairy Cell Leukaemia. 
     
     
         65 . A kit comprising an scFv according to  claim 47  or  claim 51 , or an scFv fragment thereof. 
     
     
         66 . The kit according to  claim 65 , wherein:
 (a) the scFv or scFv fragment is directly labelled; or   (b) the kit further comprises an immunoassay.   
     
     
         67 . An isolated monoclonal antibody comprising a light chain variable domain and a heavy chain variable domain wherein the light chain variable domain comprises a light chain complementarity determining region (LCDR)1, an LCDR2 and an LCDR3, and wherein the heavy chain variable domain comprises a heavy chain complementarity determining region (HCDR)1, an HCDR2 and an HCDR3,
 wherein LCDR1 comprises an amino acid sequence set forth in SEQ ID NO: 30; LCDR2 comprises an amino acid sequence set forth in SEQ ID NO: 32; and LCDR3 comprises an amino acid sequence set forth in SEQ ID NO: 34; HCDR1 comprises an amino acid sequence set forth in SEQ ID NO: 121; HCDR2 comprises an amino acid sequence set forth in SEQ ID NO: 123; and HCDR3 comprises an amino acid sequences set forth in SEQ ID NO: 248.