3-deazapurines

Abstract

This invention relates to compounds based on the 3-deazapurines ring system and to methods for making such compounds. The invention also generally relates to the field of "antisense" agents, agents that are capable of specific hybridization with a nucleotide sequence of an RNA. The 3-deazapurine-containing compounds of this invention can be useful for modulating the activity of RNA when incorporated into oligonucleotides. Oligonucleotides and their analogs are used for a variety of therapeutic and diagnostic purposes, such as treating diseases, regulating gene expression in experimental systems, assaying for RNA and for RNA products through the employment of antisense interactions with such RNA, diagnosing diseases, modulating the production of proteins and cleaving RNA in site specific fashions.

What is claimed is: 
     
       1. A compound having the formula: ##STR7## wherein G is C or N; R 1  is NH 2 , alkyl having from one to about 12 carbons, substituted alkyl having from one to about 12 carbons, alkenyl having from one to about 12 carbons, substituted alkenyl having from one to about 12 carbons, aralkyl having from about 6 to about 30 carbons, amino, R 2  is amino, alkyl having from one to about 12 carbons, substituted alkyl having from one to about 12 carbons, alkenyl having from one to about 12 carbons, substituted alkenyl having from one to about 12 carbons, aralkyl having from about 6 to about 30 carbons; and Y is H, a nitrogen protecting group, ribose or deoxyribose. 
     
     
       2. The compound of claim 1 wherein Y is ribose or deoxyribose. 
     
     
       3. The compound of claim 1 wherein R 2  is amino. 
     
     
       4. The compound of claim 1 wherein R 1  is alkyl having from one to about 12 carbon atoms. 
     
     
       5. The compound of claim 1 wherein R 1  is alkenyl having from two to about 12 carbon atoms. 
     
     
       6. The compound of claim 1 wherein R 1  is aralkyl having from about 6 to about 30 carbon atoms. 
     
     
       7. The compound of claim 2 wherein R 1  is alkyl having from one to about 12 carbon atoms. 
     
     
       8. The compound of claim 2 wherein R 1  is alkenyl having from two to about 12 carbon atoms. 
     
     
       9. The compound of claim 2 wherein R 1  is aralkyl having from about 6 to about 30 carbon atoms. 
     
     
       10. The compound of claim 1 wherein G is N; R 1  is alkyl having from one to about 12 Garbon atoms; R 2  is amino; and Y is ribose or deoxyribose. 
     
     
       11. The compound of claim 1 wherein G ie N; R 1  is alkenyl having from two to about 12 carbon atoms; R 2  is amino; and Y is ribose or deoxyribose. 
     
     
       12. The compound of claim 1 wherein G is N; R 1  is aralkyl having from about 6 to about 30 Garbon atoms; R 2  is amino; and Y is ribose or deoxyribose. 
     
     
       13. The compound of claim 1 wherein G is N; R 1  is 1-methyl octane, 1-propene, phenyl methyl, or napthylethyl; R 2  is amino; and Y is ribose or deoxyribose. 
     
     
       14. The compound of claim 1 wherein Y is ribose or deoxyribose, said ribose or deoxyribose having an activated phosphate group at the 3' position. 
     
     
       15. A compound having the formula: ##STR8## wherein G is C or N; R B  is H, NH 2 , alkyl having from one to about 12 carbons, substituted alkyl having from one to about 12 carbons, alkenyl having from one to about 12 carbons, substituted alkenyl having from one to about 12 carbons, aralkyl having from about 6 to about 30 carbons, amino; R 4  is NH 2 , alkyl having from one to about 12 carbons, substituted alkyl having from one to about 12 carbons, alkenyl having from one to about 12 carbons, substituted alkenyl having from one to about 12 carbons, aralkyl having from about 6 to about 30 carbons, amino; and Y is H, a nitrogen protecting group, ribose or deoxyribose; provided that when R 3  is H, R 4  is not NH 2 . 
     
     
       16. The compound of claim 15 wherein Y is ribose or deoxyribose. 
     
     
       17. The compound of claim 15 wherein R 3  is alkyl having from one to about 12 carbon atoms. 
     
     
       18. The compound of claim 15 wherein R 3  is alkenyl having from two to about 12 carbon atoms. 
     
     
       19. The compound of claim 15 wherein R 3  is aralkyl having from about 6 to about 30 carbon atoms. 
     
     
       20. The compound of claim 16 wherein R 3  is alkyl having from one to about 12 carbon atoms. 
     
     
       21. The compound of claim 16 wherein R 3  is alkenyl having from two to about 12 carbon atoms. 
     
     
       22. The compound of claim 16 wherein R 3  is aralkyl having up to about 6 to 30 carbon atoms. 
     
     
       23. The compound of claim 15 wherein G is N; R 3  is alkyl having from one to about 12 carbon atoms; R 4  is NH 2  ; and Y is ribose or deoxyribose. 
     
     
       24. The compound of claim 15 wherein G is N; R 3  is alkenyl having from two to about 12 carbon atoms; R 4  is NH 2  ; and Y is ribose or deoxyribose. 
     
     
       25. The compound of claim 15 wherein G is N; R 3  is aralkyl having from about 6 to about 30 carbon atoms; R 4  is NH 2;  and Y is ribose or deoxyribose. 
     
     
       26. The compound of claim 1 wherein G is N; R 3  is 1-methyl octane, 1-propene, phenyl methyl, or napthylethyl; R 4  is NH 2  ; and Y is ribose or deoxyribose. 
     
     
       27. The compound of claim 15 wherein Y is ribose or deoxyribose, said ribose or deoxyribose having an activated phosphate group at the 3' position.