Aspartic protease inhibitors
Abstract
The present invention provides a compound of formula (I) wherein a, b, c, d, and e, are R7, OR7, SR7, NR7R8, NHCOR7, CO2R7, CN, NO2, NH2, N3, or a halogen. R7 and R8 are H or alkyl, R1 and R2 are H or alkyl, and R3 is a non-aromatic substituent. Substituent A is OH, NH2, or SH. Substituents B and B1 include amide and sulfonamide groups, which can be cyclic, acyclic, or amino acid derivatives. Alternatively, B and R' together with the nitrogen to which they are bonded, and/or B' and R2 together with the nitrogen to which they are bonded, define a heterocycle. The present invention further provides a pharmaceutical composition that includes a carrier and a therapeutically effective amount of at least one compound of the present invention. The present invention further provides therapeutic methods that include administering a therapeutically effective amount of at least one compound of the present invention
Claims
exact text as granted — not AI-modifiedWhat is claimed is:
1. A compound of the formula:
wherein:
a, b, c, d, and e, are the same or different and each is H, R 7 , OR 7 , SR 7 , NR 7 R 8 , NHCOR 7 , CO 2 R 7 , CN, NO 2 , NH 2 , N 3 , or a halogen, wherein R 7 and R 8 are the same or different and each is H, an unsubstituted C 1 -C 20 alkyl, or a substituted C 1 -C 20 alkyl;
R 1 and R 2 are the same or different and each is H or a C 1 -C 20 alkyl, wherein R 1 and R 2 are unsubstituted or substituted;
R 3 is isopropyl, wherein R 3 is unsubstituted or substituted;
A is OH, NH 2 , or SH;
B and B′ are the same or different and each is of the formula:
wherein:
m, n, and z, are the same or different and each is an integer from 0 to 4;
Q is SO 2 or C═(X), wherein X is O, NR 7 , NCO 2 R 7 , NSO 2 R 7 , or S;
Y is O, S, NR 4 , a C 6 -C 15 aryl, or a heteroaryl having 6 atoms, at least two of which are heteroatoms, in the ring skeleton thereof, wherein R 4 is H, a C 1 -C 20 an alkyl, a C 2 -C 20 alkenyl, a C 2 -C 20 alkynyl, a cycloalkyl having from 3 to about 10 carbon atoms in the carbocyclic skeleton thereof, a heterocycloalkyl having 6 atoms, at least two of which are heteroatoms, in the ring skeleton thereof, a phenyl, a naphthyl, or a heteroaryl having 6 atoms, at least two of which are heteroatoms, in the ring skeleton thereof, wherein R 4 is unsubstituted or substituted, and, when Y is an aryl or a heteroaryl, it is unsubstituted or substituted;
R 5 is H, a C 1 -C 20 alkyl, a C 2 -C 20 alkenyl, C 2 -C 20 alkynyl, a cycloalkyl having from 3 to about 10 carbon atoms in the carbocyclic skeleton thereof, a heterocycloalkyl having 6 atoms, at least two of which are heteroatoms, in the ring skeleton thereof, a phenyl, a naphthyl, or a heteroaryl having 6 atoms, at least two of which are heteroatoms, in the ring skeleton thereof, wherein R 5 is unsubstituted or substituted;
L is O, S, or NH;
R 6 is H, a C 1 -C 20 alkyl, a C 2 -C 20 alkenyl, a C 2 -C 20 alkynyl, a cycloalkyl having from 3 to about 10 carbon atoms in the carbocyclic skeleton thereof, a heterocycloalkyl having 6 atoms, at least two of which are heteroatoms, in the ring skeleton thereof, a phenyl, a naphthyl, or a heteroaryl having 6 atoms, at least two of which are heteroatoms, in the ring skeleton thereof, wherein R 6 is unsubstituted or substituted; and
W of formula (If) is an organic residue comprising at least one carbon atom and at least one heteroatom, wherein W shares at least two bonds with the nitrogen atom bonded thereto such that the substituent:
of formula (If) defines a heterocycle, having 6 atoms, at least two of which are heteroatoms, in the ring skeleton thereof, which is unsubstituted or substituted; and
E is H, (CH 2 ) q R 9 , O(CH 2 ) q R 9 , S(CH 2 ) q R 9 , N[(CH 2 ) q R 9 ]R 10 , CO(CH 2 ) q R 9 , CS(CH 2 ) q R 9 , CO 2 (CH 2 ) q R 9 , NHCO 2 (CH 2 ) q R 9 , C(O)S(CH 2 ) q R 9 , C(S)O(CH 2 ) q R 9 , CS 2 (CH 2 ) q R 9 , C(O)N[(CH 2 ) q R 9 ]R 10 , NHC(O)N[(CH 2 ) q R 9 ]R 10 , C(S)N[(CH 2 ) q R 9 ]R 10 , NHC(S)N[(CH 2 ) q R 9 ]R 10 , NR 10 CO(CH 2 ) q R 9 , NR 10 CS(CH 2 ) q R 9 , NR 10 CO 2 (CH 2 ) q R 9 , NR 10 C(O)S(CH 2 ) q R 9 , NR 10 CS 2 (CH 2 ) q R 9 , O 2 C(CH 2 ) q R 9 , S 2 C(CH 2 ) q R 9 , SCO(CH 2 ) q R 9 , OCS(CH 2 ) q R 9 , SO 2 (CH 2 ) q R 9 , OSO 2 (CH 2 ) q R 9 , NR 10 SO 2 (CH 2 ) q R 9 , CN, NO 2 , N 3 , or a halogen, wherein:
q is an integer from 0-4;
R 9 is a C 1 -C 20 alkyl, a C 2 -C 20 alkenyl, a C 2 -C 20 alkynyl, a cycloalkyl having from 3 to about 10 carbon atoms in the carbocyclic skeleton thereof, a heterocycloalkyl having 6 atoms, at least two of which are heteroatoms, in the ring skeleton thereof, a phenyl, a naphthyl, or a heteroaryl having 6 atoms, at least two of which are heteroatoms, in the ring skeleton thereof, wherein R 9 is unsubstituted or substituted; and
R 10 is H, an unsubstituted C 1 -C 20 alkyl, or a substituted C 1 -C 20 alkyl; or
B and R 1 together with the nitrogen atom to which they are bonded, and/or B′ and R 2 together with the nitrogen atom to which they are bonded, comprise a heterocycle, having 6 atoms in the ring skeleton thereof, of the formula:
wherein W and E are as defined herein and said heterocycle is unsubstituted or substituted, wherein:
when R 1 , R 2 and/or R 4 is substituted, each is substituted with one or more substituents selected from the group consisting of R 7 , OR 7 SR 7 , NR 7 R 8 , CN, NO 2 , N 3 , and halogens;
when R 3 is substituted, it is substituted with one or more substituents selected from the group consisting of OR 7 , SR 7 , CN, NR 7 R 8 , NO 2 , N 3 , and halogens;
when Y and/or R 5 is substituted, it is substituted with one or more substituents selected from the group consisting of, R 7 , OR 7 , SR 7 , NR 7 R 8 , COR 7 , CSR 7 , CO 2 R 7 , C(S)OR 7 , CS 2 R 7 , C(O)NR 7 R 8 , NHC(O)NR 7 R 8 , C(S)NR 7 R 8 , NHC(S)NR 7 R 8 , NR 8 COR 7 , NR 8 CSR 7 , NR 8 CO 2 R 7 , NR 8 C(O)SR 7 , NR 8 CS 2 R 7 , O 2 CR 7 , S 2 CR 7 , SCOR 7 , OCSR 7 , SO 2 R 7 , OSO 2 R 7 , NR 8 SO 2 R 7 , a guanidyl, CN, NO 2 , N 3 , and halogens;
when R 6 is substituted, it is substituted with one or more substituents selected from the group consisting of R 7 , OR 7 , SR 7 , CO 2 R 7 , SO 2 R 7 , NR 7 R 8 , CN, NO 2 , N 3 , a cycloalkyl having from 3 to about 10 carbon atoms in the carbocyclic skeleton thereof, a heterocycloalkyl having 6 atoms, at least two of which are heteroatoms, in the ring skeleton thereof, a phenyl, a naphthyl, or a heteroaryl having 6 atoms, at least two of which are heteroatoms, in the ring skeleton thereof, and halogens;
when W of formula (If), the heterocycle defined by B and R 1 together with the nitrogen atom to which they are bonded, and/or the heterocycle defined by B′ and R 2 together with the nitrogen atom to which they are bonded, are substituted, each is substituted with one or more substituents selected from the group consisting of oxo, thio, R 7 , OR 7 , SR 7 , NR 7 R 8 , COR 7 , CSR 7 , CO 2 R 7 , C(O)SR 7 , C(S)OR 7 , CS 2 R 7 , C(O)NR 7 R 8 , NHC(O)NR 7 R 8 , C(S)NR 7 R 8 , NHC(S)NR 7 R 8 , NR 8 COR 7 , NR 8 CSR 7 , NR 8 CO 2 R 7 , NR 8 C(O)SR 7 , NR 8 CS 2 R 7 , O 2 CR 7 , S 2 CR 7 , SCOR 7 , OCSR 7 , SO 2 R 7 , OSO 2 R 7 , NR 8 SO 2 R 7 , CN, NO 2 , N 3 , and halogens,
when R 1 and/or R 8 are substituted, each is substituted with one or more halogen atoms;
when R 9 is substituted, it is substituted with one or more substituents selected from the group consisting of R 7 , OR 7 , SR 7 , NR 7 R 8 , COR 7 , CSR 7 , CO 2 R 7 , C(O)SR 7 , C(S)OR 7 , CS 2 R 7 , C(O)NR 7 R 8 , NHC(O)NR 7 R 8 , C(S)NR 7 R 8 , NHC(S)NR 7 R 8 , NR 8 COR 7 , NR 8 CSR 7 , NR 8 CO 2 R 7 , NR 8 C(O)SR 7 , NR 8 CS 2 R 7 , O 2 CR 7 , S 2 CR 7 , SCOR 7 , OCSR 7 , SO 2 R 7 , OSO 2 R 7 , NR 8 SO 2 R 7 , a guanidyl, oxo, thio, CN, NO 2 , N 3 , and halogens; and
when R 10 is substituted, it is substituted with one or more substituents selected from the group consisting of CN, NH 2 , NO 2 , N 3 , and halogens;
or a pharmacologically acceptable salt thereof.
2. The compound of claim 1 , wherein a, b, c, d, e, R 1 , and R 2 are H, and A is OH.
3. The compound of claim 1 , wherein at least one of B and B′ is:
4. The compound of claim 3 , wherein Q is C═O, Y is O or S, m and n are the same or different and each is 0 or 1, and E is R 9 .
5. The compound of claim 4 , wherein Y is O, and at least one of B or B′is:
wherein R 9 is a heterocycloalkyl having 6 atoms, at least two of which are heteroatoms, in the ring skeleton thereof, a phenyl, a naphthyl, or a heteroaryl having 6 atoms, at least two of which are heteroatoms, in the ring skeleton thereof, wherein R 9 is unsubstituted or is substituted with one or more substituents selected from the group consisting of R 7 , OR 7 , SR 7 , NR 7 R 8 , COR 7 , CSR 7 , CO 2 R 7 , C(O)SR 7 , C(S)OR 7 , CS 2 R 7 , C(O)NR 7 R 8 , NHC(O)NR 7 R 8 , C(S)NR 7 R 8 , NHC(S)NR 7 R 8 , NR 8 COR 7 , NR 8 CSR 7 , NR 8 CO 2 R 7 , NR 8 C(O)SR 8 , NR 7 CS 2 R 7 , O 2 CR 7 , S 2 CR 7 , SCOR 7 , OCSR 7 , SO 2 R 7 , OSO 2 R 7 , NR 8 SO 2 R 7 , a guanidyl, CN, NO 2 , N 3 , and halogens, wherein R 7 and R 8 are the same or different and each is H, an unsubstituted C 1 -C 20 alkyl or a C 1 -C 20 alkyl substituted with one or more halogen atoms.
6. The compound of claim 5 , wherein R 9 is selected from the group consisting of 2-methylphenyl, 2,6-dimethylphenyl, 3-amino-2-methylphenyl, 3-acetamido-2-methylphenyl, 3-hydroxy-2-methylphenyl, 4-hydroxy-2-methylphenyl, 4-amino-2-methylphenyl, 3-acetamido-2-methylphenyl, 4-methoxy-2-methylphenyl, 4-fluoro-2-methylphenyl, 4-trifluoromethyl-2-methylphenyl, 2,4-dimethylphenyl, 2-methyl-4-nitrophenyl, 3-amino-2,6-dimethylphenyl, 3-hydroxy-2,6-dimethylphenyl, 2-methyl-3-nitrophenyl, 4-acetyl-2-methylphenyl, 4-aminocarbonyl-2-methylphenyl, benzopiperazinyl, tert-butyl, hydroxy tert-butyl, and morpholinyl.
7. The compound of claim 1 , wherein B or B′ is:
8. The compound of claim 7 , wherein B or B′ is of formula (Ic), Q is C═O, n is 0 and E is R 9 , wherein R 9 is a heterocycloalkyl having 6 atoms, at least two of which are heteroatoms, in the ring skeleton thereof.
9. The compound of claim 8 , wherein R 9 is a morpholinyl substituent.
10. The compound of claim 7 , wherein:
z is 0 or 1;
R 5 is an unsubstituted C 1 -C 20 alkyl or a C 1 -C 20 alkyl substituted with one or more substituents selected from the group consisting of R 7 , OR 7 and C(O)NR 7 R 8 ;
R 6 is H;
Q is C═O;
Y is O or S;
m and n are the same or different and each is 0 or 1; and
E is R 9 , wherein R 9 is a phenyl, a naphthyl or a heteroaryl having 6 atoms, at least two of which are heteroatoms, in the ring skeleton thereof, wherein R 9 is unsubstituted or is substituted with one or more substituents selected from the group consisting of R 7 , OR 7 , SR 7 , NR 7 R 8 , COR 7 , CSR 7 , CO 2 R 7 , C(O)SR 7 , C(S)OR 7 , CS 2 R 7 , C(O)NR 7 R 8 , NHC(O)NR 7 R 8 , C(S)NR 7 R 8 , NHC(S)NR 7 R 8 , NR 8 COR 7 , NR 8 CSR 7 , NR 8 CO 2 R 7 , NR 8 C(O)SR 7 , NR 8 CS 2 R 7 , O 2 CR 7 , S 2 CR 7 , SCOR 7 , OCSR 7 , SO 2 R 7 , OSO 2 R 7 , NR 8 SO 2 R 7 , a guanidyl, CN, NO 2 , N 3 , and halogens;
wherein R 7 and R 8 are the sane or different and each is H, an unsubstituted C 1 -C 20 alkyl or a C 1 -C 20 alkyl substituted with one or more halogens.
11. The compound of claim 10 , wherein B or B′ is of the formula (Id), wherein z is 0, R 5 is isopropyl, Y is O, m is 1, and n is 0, such that B or B′ is:
wherein R 9 is phenyl, which is unsubstituted or is substituted with one or more substituents selected from the group consisting of R 7 , OR 7 , SR 7 , NR 7 R 8 , COR 7 , CSR 7 , CO 2 R 7 , C(O)SR 7 , C(S)OR 7 , CS 2 R 7 , C(O)NR 7 R 8 , NHC(O)NR 7 R 8 , C(S)NR 7 R 8 , NHC(S)NR 7 R 8 , NR 8 COR 7 , NR 8 CSR 7 , NR 8 CO 2 R 7 , NR 8 C(O)SR 7 , NR 8 CS 2 R 7 , O 2 CR 7 , S 2 CR 7 , SCOR 7 , OCSR 7 , SO 2 R 7 , OSO 2 R 7 , NR 8 SO 2 R 7 , a guanidyl, CN, NO 2 , N 3 , and halogens, wherein R 7 and R 8 are the same or different and each is H, an unsubstituted C 1 -C 20 alkyl or a C 1 -C 20 alkyl substituted with one or more halogens.
12. The compound of claim 1 , wherein B or B′ is of the formula (Ie), wherein L i's NH, z is 0, and R 5 is isopropyl such that B or B′ is:
wherein E is H, COR 9 , or SO 2 R 9 , wherein R 9 is methyl.
13. The compound of claim 1 , wherein B or B′ is:
wherein the heterocycle:
of formula (If) is unsubstituted or substituted with one or more substituents selected from the group consisting of R 7 , OR 7 , SR 7 , NR 7 R 8 , COR 7 , CSR 7 , CO 2 R 7 , C(O)SR 7 , C(S)OR 7 , CS 2 R 7 , C(O)NR 7 R 8 , NHC(O)NR 7 R 8 , C(S)NR 7 R 8 , NHC(S)NR 7 R 8 , NR 8 COR 7 , NR 8 CSR 7 , NR 8 CO 2 R 7 , NR 8 C(O)SR 7 , NR 8 CS 2 R 7 , O 2 CR 7 , S 2 CR 7 ; SCOR 7 , OCSR 7 , SO 2 R 7 , OSO 2 R 7 , NR 8 SO 2 R 7 , CN, NO 2 , N 3 , and halogens, wherein R 7 and R 8 are the same or different and each is H, an unsubstituted C 1 -C 20 alkyl or a C 1 -C 20 alkyl substituted with one or more halogen atoms.
14. The compound of claim 13 , wherein W is of the formula —(CH 2 ) 2 O(CH 2 ) 2 —, —(CH 2 ) 2 S(CH 2 ) 2 —, —(CH 2 ) 2 SO(CH 2 ) 2 —, —(CH 2 ) 2 SO 2 (CH 2 ) 2 —, or —(CH 2 ) 2 NH(CH 2 ) 2 —, wherein W is unsubstituted or substituted.
15. The compound of claim 13 , z is 0, R 5 is isopropyl, and W of formula (If) is an organic residue that defines a heterocycle such that B or B′ is of the formula:
wherein said heterocycle is unsubstituted or substituted with one or more substituents selected from the group consisting of R 7 , OR 7 , SR 7 , NR 7 R 8 , COR 7 , CSR 7 , CO 2 R 7 , C(O)SR 7 , C(S)OR 7 , CS 2 R 7 , C(O)NR 7 R 8 , NHC(O)NR 7 R 8 , C(S)NR 7 R 8 , NHC(S)NR 7 R 8 , NR 8 COR 7 , NR 8 CSR 7 , NR 8 CO 2 R 7 , NR 8 C(O)SR 7 , NR 8 CS 2 R 7 , O 2 CR 7 , S 2 CR 7 , SCOR 7 , OCSR 7 , SO 2 R 7 , OSO 2 R 7 , NR 8 SO 2 R 7 , CN, NO 2 , N 3 , and halogens, wherein R 7 and R 8 are the same or different and each is H, an unsubstituted C 1 -C 20 alkyl or a C 1 -C 20 alkyl substituted with one or more halogen atoms.
16. The compound of claim 3 , wherein B or B′ is:
wherein:
Q is SO 2 or C═O;
m and n are the same or different and are each 0 or 1; and
Y is a C 6 -C 15 aryl or a heteroaryl having 6 atoms, at least two of which are heteroatoms, in the ring skeleton thereof, wherein Y is unsubstituted or substituted.
17. The compound of claim 16 , wherein Q is C═O; m and n are 0; and Y is an unsubstituted phenyl or a substituted phenyl such that B or B′ is:
wherein E is H, NR 9 R 10 , NHCO 2 (CH 2 ) q R 9 , NHC(O)N[(CH 2 ) q R 9 ]R 10 , NHC(S)N[(CH 2 ) q R 9 ]R 10 , NR 10 CO[(CH 2 ) q R 9 ], NR 10 CS[(CH 2 ) q R 9 ], NR 10 CO 2 [(CH 2 ) q R 9 ], NR 10 C(O)S[(CH 2 ) q R 9 ], NR 10 CS 2 [(CH 2 ) q R 9 ], NR 10 SO 2 [(CH 2 ) q R 9 ], CN, NO 2 , N 3 , or a halogen.
18. The compound of claim 17 , wherein E is NHCO 2 (CH 2 ) q R 9 , wherein q is 0 or 1, and R 9 is a phenyl.
19. The compound of claim 1 , wherein B is bonded to the nitrogen atom bearing R 1 via an amide bond and is selected from the group consisting of:
wherein B′ is bonded to the nitrogen bearing R 2 via an amide bond and is selected from the group consisting of:
20. The compound of claim 1 , wherein B and B′ are the same or different and each is bonded to the nitrogen bearing R 1 and R 2 , respectively, via an amide bond, and each is selected from the group consisting of:
wherein R 7 is H, an unsubstituted C 1 -C 20 alkyl or a C 1 -C 20 alkyl substituted with one or more halogens, wherein each occurrence of R 7 is the same or different when said compound is substituted with two or more R 7 substituents.
21. The compound of claim 20 , wherein B and B′ are the same or different and each is of the formula:
wherein R 7 is H, an unsubstituted C 1 -C 20 alkyl or a C 1 -C 20 alkyl substituted with one or more halogens and each occurrence of R 7 on said compound is the same or different.
22. The compound of claim 1 , wherein B and R 1 together with the nitrogen atom to which they are bonded comprise a heterocycle, having 6 atoms, at least two of which are heteroatoms, in the ring skeleton thereof, of the formula:
such that said compound is of the formula:
23. The compound of claim 22 , wherein W is of the formula —(CH 2 ) 2 O(CH 2 ) 2 —, —(CH 2 ) 2 S(CH 2 ) 2 —, —(CH 2 ) 2 SO(CH 2 ) 2 —, —(CH 2 ) 2 SO 2 (CH 2 ) 2 —, or —(CH 2 ) 2 NH(CH 2 ) 2 —, wherein W is unsubstituted or substituted.
24. The compound of claim 1 , wherein B′ and R 2 together with the nitrogen atom to which they are bonded comprise a heterocycle, having 6 atoms in the ring skeleton thereof, of the formula:
such that said compound is of the formula:
25. The compound of claim 24 , wherein W is of the formula —(CH 2 ) 2 O(CH 2 ) 2 —, —(CH 2 ) 2 S(CH 2 ) 2 —, —(CH 2 ) 2 SO(CH 2 ) 2 —, —(CH 2 ) 2 SO 2 (CH 2 ) 2 —, or —(CH 2 ) 2 NH(CH 2 ) 2 —, wherein W is unsubstituted or substituted.
26. A composition comprising a carrier and a therapeutically effective amount of at least one compound of claim 1 .
27. A method of treating an HIV infection comprising administering a therapeutically effective amount of at least one compound of claim 1 .
28. A method of treating cancer comprising administering a cathepsin D inhibiting-effective amount of at least one compound of claim 1 .
29. The method of claim 28 , wherein said cancer is breast cancer.
30. A method of treating a malarial infection comprising administering a plasmepsin inhibiting-effective amount of at least one compound of claim 1 .
31. A compound having the core structure:
wherein
a, b, c, d, and e, are the same or different and each is H, R 7 , OR 7 , SR 7 , NR 7 R 8 , NHCOR 7 , CO 2 R 7 , CN, NO 2 , NH 2 , N 3 , or a halogen, wherein R 7 and R 8 are the same or different and each is H, an unsubstituted alkyl, or a substituted alkyl;
R 3 is isopropyl, wherein R 3 is unsubstituted or substituted; and
A is OH, NH 2 , or SH.Cited by (0)
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