USRE46762EActiveUtility

1′-substituted carba-nucleoside analogs for antiviral treatment

97
Assignee: GILEAD SCIENCES INCPriority: Apr 23, 2008Filed: Oct 7, 2016Granted: Mar 27, 2018
Est. expiryApr 23, 2028(~1.8 yrs left)· nominal 20-yr term from priority
A61P 31/20A61P 31/14A61P 31/12A61P 43/00A61P 31/16A61P 31/00A61P 1/16C07H 1/00C07H 19/23C07D 487/04C07F 9/65744C07H 5/06A61K 31/7052C07H 5/04A61K 31/70A61K 31/395A61K 31/41A61K 31/12C07H 19/00A61K 31/4188C07F 9/6561Y02A50/30
97
PatentIndex Score
28
Cited by
373
References
33
Claims

Abstract

Provided are pyrrolo[1,2-f][1,2,4]triazinyl, imidazo[1,5-f][1,2,4]triazinyl, imidazo[1,2-f][1,2,4]triazinyl, and [1,2,4]triazolo[4,3-f][1,2,4]triazinyl nucleosides, nucleoside phosphates and prodrugs thereof, wherein the 1′ position of the nucleoside sugar is substituted. The compounds, compositions, and methods provided are useful for the treatment of Flaviviridae virus infections, particularly hepatitis C infections.

Claims

exact text as granted — not AI-modified
What is claimed is: 
     
       1. A compound of Formula II: 
       
         
           
           
               
               
           
         
         or a pharmaceutically acceptable salt, thereof; 
       
       wherein:
 R 1 , R 3 , and R 5  are H; 
 R 2  and R 4  are, independently, OR a ; 
 R 6  is OR a , N 3 , CN, S(O) n R a , —C(═O)R 11 , —C(═O)OR 11 , —C(═O)NR 11 R 12 , —C(═O)SR 11 , —S(O)R 11 , —S(O) 2 R 11 , —S(O)(OR 11 ), —S(O) 2 (OR 11 ), —SO 2 NR 11 R 12 , halogen, substituted methyl, ethenyl, substituted ethenyl, ethynyl, or substituted ethynyl; 
 each n is independently 0, 1, or 2; 
 each R a  is independently H, (C 1 -C 8 )alkyl, (C 2 -C 8 )alkenyl, (C 2 -C 8 )alkynyl, aryl(C 1 -C 8 )alkyl, (C 4 -C 8 )carbocyclylalkyl, —C(═O)R 11 , —C(═O)OR 11 , —C(═O)NR 11 R 12 , C(═O)SR 11 , S(O)R 11 , —S(O) 2 R 11 , —S(O)(OR 11 ), —S(O) 2 (OR 11 ), or —SO 2 NR 11 R 12 ; 
 R 7  is H, —C(═O)R 11 , —C(═O)OR 11 , —C(═O)NR 11 R 12 , —C(═O)SR 11 , —S(O)R 11 , —S(O) 2 R 11 , —S(O)(OR 11 ), —S(O) 2 (OR 11 ), —SO 2 NR 11 R 12 , or 
 
       
         
           
           
               
               
           
         
         W 1  and W 2 , when taken together, are —Y 3 (C(R y ) 2 ) 3 Y 3 —; or W 1  and W 2  are each, independently, a group of the Formula Ia: 
       
       
         
           
           
               
               
           
         
         Y and each Y 1  are independently O, S, NR,  + N(O)(R)  + N(O − )(R), N(OR),  + N(O)(OR)  + N(O − )(OR), or N—NR 2 ; 
         each Y 2  is independently a bond, O, CR 2 , NR,  + N(O)(R)  + N(O − )(R), N(OR),  + N(O)(OR)  + N(O − )(OR), N—NR 2 , S, S—S, S(O), or S(O) 2 ; 
         each Y 3  is independently O, S, or NR; 
         M2 is 0, 1 or 2; 
         each R x  is independently R y  or the formula: 
       
       
         
           
           
               
               
           
         
         wherein: 
         each M1a, M1c, and M1d is independently 0 or 1; 
         M12c is 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11 or 12; 
         each R y  is independently H, F, Cl, Br, I, OH, R, —C(═Y 1 )R, —C(═Y 1 )OR, —C(═Y 1 )N(R) 2 , —N(R) 2 , —+N(R) 3  — + N(R) 3 , —SR, —S(O)R, —S(O) 2 R, —S(O)(OR), —S(O) 2 (OR), —OC(═Y 1 )R, —OC(═Y 1 )OR, —OC(═Y 1 )(N(R) 2 ), —SC(═Y 1 )R, —SC(═Y 1 )OR, —SC(═Y 1 )(N(R) 2 ), —N(R)C(═Y 1 )R, —N(R)C(═Y 1 )OR, —N(R)C(═Y 1 )N(R) 2 , —SO 2 NR 2 , —CN, —N 3 , —NO 2 , —OR, or W 3 ; or when taken together, two R y  on the same carbon atom form a carbocyclic ring of 3 to 7 carbon atoms; 
         each R is independently H, (C 1 -C 8 ) alkyl, (C 1 -C 8 ) substituted alkyl, (C 2 -C 8 )alkenyl, (C 2 -C 8 ) substituted alkenyl, (C 2 -C 8 ) alkynyl, (C 2 -C 8 ) substituted alkynyl, C 6 -C 20  aryl, C 6 -C 20  substituted aryl, C 2 -C 20  heterocyclyl, C 2 -C 20  substituted heterocyclyl, arylalkyl or substituted arylalkyl; 
         W 3  is W 4  or W 5 ; W 4  is R, —C(Y 1 )R y , —C(Y 1 )W 5 , —SO 2 R y , or —SO 2 W 5 ; and W 5  is a carbocycle or a heterocycle wherein W 5  is independently substituted with 0 to 3 R y  groups; 
         X 2  is C—R 10  and X 1  is C—R 10  or N; 
         R 8  is halogen, NR 11 R 12 , N(R 11 )OR 11 , NR 11 NR 11 R 12 , N 3 , NO, NO 2 , CHO, CN, —CH(═NR 11 ), —CH═NHNR 11 , —CH═N(OR 11 ), —CH(OR 11 ) 2 , —C(═O)NR 11 R 12 , —C(═S)NR 11 R 12 , —C(═O)OR 11 , (C 1 -C 8 )alkyl, (C 2 -C 8 )alkenyl, (C 2 -C 8 )alkynyl, (C 4 -C 8 )carbocyclylalkyl, optionally substituted aryl, optionally substituted heteroaryl, —C(═O)(C 1 -C 8 )alkyl, —S(O) n C 1 -C 8 )alkyl —S(O) n (C 1 -C 8 )alkyl, aryl(C 1 -C 8 )alkyl, OR 11  or SR 11 ; 
         R 9  and each R 10  are independently H, halogen, NR 11 R 12 , N(R 11 )OR 11 , NR 11 NR 11 R 12 , N 3 , NO, NO 2 , CHO, CN, —CH(═NR 11 ), —CH═NHNR 11 , —CH═N(OR 11 ), —CH(OR 11 ) 2 , —C(═O)NR 11 R 12 , —C(═S)NR 11 R 12 , —C(═O)OR 11 , R 11 , OR 11  or SR 11 ; 
         each R 11  and each R 12  are independently H, (C 1 -C 8 )alkyl, (C 2 -C 8 )alkenyl, (C 2 -C 8 )alkynyl, (C 4 -C 8 )carbocyclylalkyl, optionally substituted aryl, optionally substituted heteroaryl, —C(═O)(C 1 -C 8 )alkyl, —S(O) n (C 1 -C 8 )alkyl or aryl(C 1 -C 8 )alkyl; or R 11  and R 12  taken together with a nitrogen to which they are both attached to form a 3 to 7 membered heterocyclic ring wherein any one carbon atom of said heterocyclic ring can optionally be replaced with —O—, —S— or —NR a —; 
         wherein substituted methyl, substituted ethenyl and substituted ethynyl of R 6  and each (C 1 -C 8 )alkyl, (C 2 -C 8 )alkenyl, (C 2 -C 8 )alkynyl or aryl(C 1 -C 8 )alkyl of each of R 11  and R 12  are independently, optionally substituted with one or more halo, hydroxy, CN, N 3 , N(R a ) 2  or OR a ; and 
         wherein one or more of the non-terminal carbon atoms of each said (C 1 -C 8 )alkyl is optionally replaced with —O—, —S— or —NR a —. 
       
     
     
       2. The compound according to  claim 1 , wherein R 6  is OR a , N 3 , halogen, CN, substituted methyl, ethenyl, substituted ethenyl, ethynyl, or substituted ethynyl. 
     
     
       3. The compound according to  claim 1 , wherein R 2  and R 4  are OH. 
     
     
       4. The compound according to  claim 2 , wherein R 2  and R 4  are OH. 
     
     
       5. The compound according to  claim 1 , wherein R 6  is CN. 
     
     
       6. The compound according to  claim 4 , wherein R 6  is CN. 
     
     
       7. The compound according to  claim 4 , wherein R 9  is NR 11 R 12 . 
     
     
       8. The compound according to  claim 7 , wherein X 2  is C—H. 
     
     
       9. The compound according to  claim 8 , wherein X 1  is C—H. 
     
     
       10. The compound according to  claim 9 , wherein R 7  is H. 
     
     
       11. The compound according to  claim 9 , wherein 
       
         
           
           
               
               
           
         
       
     
     
       12. A compound selected from the group consisting of 
       
         
           
           
               
               
           
         
       
       or a pharmaceutically acceptable salt thereof. 
     
     
       13. A pharmaceutical composition comprising a therapeutically effective amount of a compound of  claim 1  and a pharmaceutically acceptable carrier. 
     
     
       14. The pharmaceutical composition of  claim 13  further comprising at least one additional therapeutic agent selected from the group consisting of interferons, ribavirin analogs, NS3 protease inhibitors, NS5a inhibitors, NS5b polymerase inhibitors, alphaglucosidase alpha-glucosidase 1 inhibitors, cyclophilin inhibitors, hepatoprotectants, non-nucleoside inhibitors of HCV, and other drugs for treating HCV. 
     
     
       15. A method of inhibiting HCV polymerase comprising administering to a mammal in need thereof a therapeutically effective amount of a compound of  claim 1 . 
     
     
       16. A method of treating a viral infection caused by a virus selected from the group consisting of dengue virus, yellow fever virus, West Nile virus, Japanese encephalitis virus, tick-borne encephalitis virus, Kunjin virus, Murray Valley encephalitis virus, St. Louis encephalitis virus, Omsk hemorrhagic fever virus, bovine viral diarrhea virus, Zika virus and Hepatitis C virus comprising administering to a mammal in need thereof a therapeutically effective amount of a compound or pharmaceutical composition of  claim 1 . 
     
     
       17. The method of  claim 16 , wherein the viral infection is caused by Hepatitis C virus. 
     
     
       18. The method of  claim 17  further comprising administering at least one additional therapeutic agent selected from the group consisting of interferons, ribavirin analogs, NS3 protease inhibitors, NS5b polymerase inhibitors, NS5a inhibitors, alpha-glucosidase 1 inhibitors, cyclophilin inhibitors, hepatoprotectants, non-nucleoside inhibitors of HCV, and other drugs for treating HCV. 
     
     
       19. The method of claim 16, wherein the viral infection is caused by Zika virus.  
     
     
       20. A compound of 
       
         
           
           
               
               
           
         
         or a pharmaceutically acceptable salt, thereof; 
       
       wherein:
 R 1 , R 3 , and R 5  are H; 
 R 2  and R 4  are OH; 
 R 6  is CN; 
 each R a  is independently H, (C 1 -C 8 )alkyl, (C 2 -C 8 )alkenyl, (C 2 -C 8 )alkynyl, aryl(C 1 -C 8 )alkyl, (C 4 -C 8 )carbocyclylalkyl, —C(═O)R 11 , —C(═O)OR 11 , —C(═O)NR 11 R 12 , C(═O)SR 11 , S(O)R 11 , —S(O) 2 R 11 , —S(O)(OR 11 ), —S(O) 2 (OR 11 ), or —SO 2 NR 11 R 12 ; 
 R 7  is 
 
       
         
           
           
               
               
           
         
         W 1  and W 2 , when taken together, are —Y 3 (C(R y ) 2 ) 3 Y 3 —; or W 1  and W 2  are each, independently, a group of the Formula Ia: 
       
       
         
           
           
               
               
           
         
         Y and each Y 1  are O, S, NR,  + N(O − )(R), N(OR),  + N(O − )(OR), or N—NR 2 ; 
         each Y 2  is independently a bond, O, CR 2 , NR,  + N(O − )(R), N(OR),  + N(O − )(OR), N—NR 2 , S, S—S, S(O), or S(O) 2 ; 
         each Y 3  is independently O, S, or NR; 
         M2 is 0, 1 or 2; 
         each R x  is independently R y  or the formula: 
       
       
         
           
           
               
               
           
         
       
       wherein:
 each M1a, M1c, and M1d is independently 0 or 1; 
 M12c is 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11 or 12; 
 each R y  is independently H, F, Cl, Br, I, OH, R, —C(═Y 1 )R, —C(═Y 1 )OR, —C(═Y 1 )N(R) 2 , —N(R) 2 , — + N(R) 3 , —SR, —S(O)R, —S(O) 2 R, —S(O)(OR), —S(O) 2 (OR), —OC(═Y 1 )R, —OC(═Y 1 )OR, —OC(═Y 1 )(N(R) 2 ), —SC(═Y 1 )R, —SC(═Y 1 )OR, —SC(═Y 1 )(N(R) 2 ), —N(R)C(═Y 1 )R, —N(R)C(═Y 1 )OR, —N(R)C(═Y 1 )N(R) 2 , —SO 2 NR 2 , —CN, —N 3 , —NO 2 , —OR, or W 3 ; or when taken together, two R y  on the same carbon atom form a carbocyclic ring of 3 to 7 carbon atoms; 
 each R is independently H, (C 1 -C 8 ) alkyl, (C 1 -C 8 ) substituted alkyl, (C 2 -C 8 )alkenyl, (C 2 -C 8 ) substituted alkenyl, (C 2 -C 8 ) alkenyl, (C 2 -C 8 ) substituted alkenyl, C 6 -C 20  aryl, C 6 -C 20  substituted aryl, C 2 -C 20  heterocyclyl, C 2 -C 20  substituted heterocyclyl, arylalkyl or substituted arylalkyl; 
 W 3  is W 4  or W 5 ; W 4  is R, —C(Y 1 )R y , —C(Y 1 )W 5 , —SO 2 R y , or —SO 2 W 5 ; and W 5  is a carbocycle or a heterocycle wherein W 5  is independently substituted with 0 to 3 R y  groups; 
 X 2  is C—H and X 1  is C—H; 
 R 8  is halogen, NR 11 R 12 , N(R 11 )OR 11 , NR 11 NR 11 R 12 , N 3 , NO, NO 2 , CHO, CN, —CH(═NR 11 ), —CH═NHNR 11 , —CH═N(OR 11 ), —CH(OR 11 ) 2 , —C(═O)NR 11 R 12  , —C(═S)NR 11 R 12 , —C(═O)OR 11 , (C 1 -C 8 )alkyl, (C 2 -C 8 )alkenyl, (C 2 -C 8 )alkynyl, (C 4 -C 8 )carbocyclylalkyl, optionally substituted aryl, optionally substituted heteroaryl, —C(═O)(C 1 -C 8 )alkyl, —S(O) n (C 1 -C 8 )alkyl, aryl(C 1 -C 8 )alkyl, OR 11  or SR 11 ; 
 R 9  is H, halogen, NR 11 R 12 , N(R 11 )OR 11 , NR 11 NR 11 R 12 , N 3 , NO, NO 2 , CHO, CN, —CH(═NR 11 ), —CH═NHNR 11 , —CH═N(OR 11 ), —CH(OR 11 ) 2 , —C(═O)NR 11 R 12 , —C(═S)NR 11 R 12 , —C(═O)OR 11 , R 11 , OR 11  or SR 11 ; 
 each R 11  and each R 12  are independently H, (C 1 -C 8 )alkyl, (C 2 -C 8 )alkenyl, (C 2 -C 8 )alkynyl, (C 4 -C 8 )carbocyclylalkyl, optionally substituted aryl, optionally substituted heteroaryl, —C(═O)(C 1 -C 8 )alkyl, —S(O) n (C 1 -C 8 )alkyl or aryl(C 1 -C 8 )alkyl; or R 11  and R 12  taken together with a nitrogen to which they are both attached to form a 3 to 7 membered heterocyclic ring wherein any one carbon atom of said heterocyclic ring can optionally be replaced with —O—, —S— or —NR a —; 
 wherein each (C 1 -C 8 )alkyl, (C 2 -C 8 )alkenyl, (C 2 -C 8 )alkynyl or aryl(C 1 -C 8 )alkyl of each of R 11  and R 12  are independently, optionally substituted with one or more halo, hydroxy, CN, N 3 , N(R a ) 2  or OR a ; and 
 wherein one or more of the non-terminal carbon atoms of each said (C 1 -C 8 )alkyl is optionally replaced with —O—, —S— or —NR a —.  
 
     
     
       21. The compound of claim 20, wherein 
       
         
           
           
               
               
           
         
       
       is selected from 
       
         
           
           
               
               
           
         
         wherein Y 2  is, independently, a bond, O, or CR 2 .  
       
     
     
       22. The compound of claim 20, wherein W 1  and W 2  are each, independently, a group of the Formula Ia.  
     
     
       23. A pharmaceutical composition comprising the compound of claim 20.  
     
     
       24. A method of treating a Flaviviridae viral infection in a human in need thereof by administering the compound of claim 20.  
     
     
       25. The method of treating a Flaviviridae viral infection of claim 24 wherein the Flaviviridae viral infection is caused by a Zika virus.  
     
     
       26. A method of treating a Flaviviridae viral infection by contacting a cell with the compound of claim 20.  
     
     
       27. The method of treating a Flaviviridae viral infection of claim 26 wherein the Flaviviridae viral infection is caused by a Zika virus.  
     
     
       28. A compound: 
       
         
           
           
               
               
           
         
       
     
     
       29. A pharmaceutical composition comprising the compound of claim 28.  
     
     
       30. A method of treating a Flaviviridae viral infection in a human in need thereof by administering the compound of claim 28.  
     
     
       31. The method of treating a Flaviviridae viral infection of claim 30 wherein the Flaviviridae viral infection is caused by a Zika virus.  
     
     
       32. A method of treating a Flaviviridae viral infection by contacting a cell with the compound of claim 28.  
     
     
       33. The method of treating a Flaviviridae viral infection of claim 32 wherein the Flaviviridae viral infection is caused by a Zika virus.

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