US11780834B2ActiveUtilityA1

Solid forms of 3-((1R,3R)-1-(2,6-difluoro-4-((1-(3-fluoropropyl)azetidin-3- yl)amino)phenyl)-3-methyl-1,3,4,9-tetrahydro-2H-pyrido[3,4-b]indol-2-yl)-2,2-difluoropropan-1-ol and processes for preparing fused tricyclic compounds comprising a substituted phenyl or pyridinyl moiety, including methods of their use

68
Assignee: HOFFMANN LA ROCHEPriority: Jun 21, 2018Filed: Dec 3, 2020Granted: Oct 10, 2023
Est. expiryJun 21, 2038(~12 yrs left)· nominal 20-yr term from priority
A61P 35/00C07D 205/04C07C 2601/02C07D 471/04A61K 31/437C07D 209/14C07B 2200/07C07D 209/16A61P 35/04C07D 403/14C07B 2200/13C07D 401/12
68
PatentIndex Score
0
Cited by
110
References
72
Claims

Abstract

Provided herein are solid forms, salts, and formulations of 3-((1R,3R)-1-(2,6-difluoro-4-((1-(3-fluoropropyl)azetidin-3-yl)amino)phenyl)-3-methyl-1,3,4,9-tetrahydro-2H-pyrido[3,4-b]indol-2-yl)-2,2-difluoropropan-1-ol, processes and synthesis thereof, and methods of their use in the treatment of cancer.

Claims

exact text as granted — not AI-modified
What is claimed is: 
     
       1. A process for preparing a compound of formula (VIII) or a salt thereof, the process comprising:
 (a) reacting a reaction mixture comprising a compound of formula (IV), a compound of formula (V) or a compound of formula (X), and an organic solvent to form a compound of formula (VI) according to step 1 below 
 
       
         
           
           
               
               
           
         
         wherein 
         B is substituted or unsubstituted indolyl, benzofuranyl, benzothiophenyl, aza-indolyl, indazolyl, benzimidazolyl, pyrrolopyridinyl, furopyridinyl, thienopyridinyl, pyrrolopyridazinyl, pyrrolopyrimidinyl, pyrrolopyrazinyl, thienopyridazinyl, thienopyrimidinyl, thienopyrazinyl, furopyridazinyl, furopyrimidinyl, or furopyrazinyl; 
         each of R 1a  and R 1b  is independently hydrogen, fluorine, chlorine, —OH, C 1-3  alkyl, C 1-3  haloalkyl, C 1-3  alkoxy, C 1-3  hydroxyalkyl, and —CN, C 3-6  cycloalkyl, or C 3-6  spirocycloalkyl, 
         n is an integer of 2 or 3, 
         each of R 2a  and R 2b  is independently hydrogen, halogen, —OH, C 1-3  alkyl, C 1-3  haloalkyl, C 1-3  alkoxy, C 1-3  hydroxyalkyl, —CN, C 3-6  cycloalkyl, or C 3-6  spirocycloalkyl, 
         R 3a  and R 3b  are independently hydrogen, C 1-3  alkyl, C 1-3  haloalkyl, C 1-3  alkoxy, —CN, C 3-6  cycloalkyl, C 3-6  heterocycloalkyl, phenyl, C 3-6  heteroaryl, or C 3-6  spirocycloalkyl, 
         J is phenyl or pyridinyl; 
         each R 4  is independently hydrogen, halogen or C 1-3  alkyl, 
         s is an integer from 0 to 2, 
         LG is a leaving group, 
         LG and CHO are located in the para position with respect to each other on J on the compound of formula (V), 
         PG is an aldehyde protecting group, 
         LG and CH-PG are located in the para position with respect to each other on J on the compound formula (X), and 
         each asterisk independently represents a chiral center wherein the carbon bearing R 3a  and R 3b  is a chiral center when R 3a  and R 3b  are different; and 
         (b) reacting a reaction mixture comprising the compound of formula (VI), an organic solvent, and a compound of formula (VII) or a salt thereof to form a compound of formula (VIII) or a salt thereof according to step 2 below 
       
       
         
           
           
               
               
           
         
         wherein 
         G is C 1-3  alkyl, 
         p is 0 or 1, 
         E is substituted or unsubstituted azetidinyl or pyrrolidinyl, 
         each R 5  is independently hydrogen, halogen, —OH, —CN, C 1-5  alkoxy, or C 1-5  hydroxyalkyl, 
         v is an integer from 1 to 5, and 
         R 6  is halogen or —CN; 
         R 10  is hydrogen or C 1-3  alkyl. 
       
     
     
       2. The process of  claim 1 , wherein B is a substituted or unsubstituted indolyl, benzofuranyl, or benzothiophenyl. 
     
     
       3. The process of  claim 2 , wherein B is a substituted or unsubstituted indolyl. 
     
     
       4. The process wherein  1 , is a substituted or unsubstituted pyrrolopyridazinyl, pyrrolopyrimidinyl, or pyrrolopyrazinyl. 
     
     
       5. The process of  claim 1 , wherein B is substituted with one or two substituents independently selected from fluorine, chlorine, C 1-3  alkyl, C 1-3  haloalkyl, —CN, —OH, C 1-3  alkoxy, or C 1-3  hydroxyalkyl. 
     
     
       6. The process of  claim 1 , wherein each of R 1a  and R 1b  is independently hydrogen, —F, —Cl, —OH, —CN, —CH 3 , —CF 3 , —CHF 2 , —CH 2 F, or spirocyclopropyl. 
     
     
       7. The process of  claim 1 , wherein n is 3. 
     
     
       8. The process of  claim 1 , wherein: 
       
         
           
           
               
               
           
         
       
     
     
       9. The process of  claim 1 , wherein each of R 2a  and R 2b  is hydrogen. 
     
     
       10. The process of  claim 1 , wherein R 3a  and R 3b  are independently hydrogen or —CH 3 . 
     
     
       11. The process of  claim 1 , wherein each R 4  is fluorine. 
     
     
       12. The process of  claim 1 , wherein s is 2. 
     
     
       13. The process of  claim 1 , wherein the leaving group is bromine. 
     
     
       14. The process of  claim 1 , wherein p is 0. 
     
     
       15. The process of  claim 1 , wherein the structure of the moiety of formula 
       
         
           
           
               
               
           
         
       
       of Compound (VII) and Compound (VIII) is: 
       
         
           
           
               
               
           
         
         wherein each R 5  is hydrogen. 
       
     
     
       16. The process of  claim 1 , wherein v is 3. 
     
     
       17. The process of  claim 1 , wherein R 6  is fluorine. 
     
     
       18. The process of  claim 1 , wherein the compound of formula (VII) is a salt of an acid. 
     
     
       19. The process of  claim 1 , wherein step 1 further comprises an acid catalyst. 
     
     
       20. The process of  claim 1 , wherein step 2 further comprises a transition metal catalyst. 
     
     
       21. The process of  claim 1 , wherein the compound of formula (IV) is: 
       
         
           
           
               
               
           
         
       
       or salt thereof, including stereoisomers thereof. 
     
     
       22. The process of  claim 1 , wherein the compound of formula (V) is: 
       
         
           
           
               
               
           
         
       
       or a salt thereof. 
     
     
       23. The process of  claim 1 , wherein the compound of formula (X) is: 
       
         
           
           
               
               
           
         
       
     
     
       24. The process of  claim 1 , wherein the compound of formula (VI) is: 
       
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         
           
           
               
               
           
         
       
       or a salt thereof, including stereoisomers thereof. 
     
     
       25. The process of  claim 1 , wherein the compound of formula (VII) is: 
       
         
           
           
               
               
           
         
       
       or a salt thereof. 
     
     
       26. The process of  claim 1 , wherein the compound of formula (VIII) is: 
       
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         
           
           
               
               
           
         
       
       or a pharmaceutically acceptable salt thereof including stereoisomers thereof. 
     
     
       27. The process of  claim 26 , further comprising contacting the compound of formula (VIII) with (2R-3R)-tartaric acid in the presence of an organic solvent. 
     
     
       28. The process of  claim 1 , wherein the compound of formula (VIII) is: 
       
         
           
           
               
               
           
         
         or a pharmaceutically acceptable salt thereof. 
       
     
     
       29. The process of  claim 28 , wherein the compound of formula (VIII) is: 
       
         
           
           
               
               
           
         
       
     
     
       30. The process of  claim 1 , further comprising crystallizing the compound of formula (VIII) as the tartaric acid salt thereof. 
     
     
       31. A process for preparing a compound of formula (VIII) or a salt thereof, the process comprising reacting a reaction mixture comprising a compound of formula (IX) or a compound of formula (XI), a compound of formula (IV) and an organic solvent to form the compound of formula (VIII) or a salt thereof according to step 1 below 
       
         
           
           
               
               
           
         
         wherein: 
         B is substituted or unsubstituted indolyl, benzofuranyl, benzothiophenyl, aza-indolyl, indazolyl, benzimidazolyl, pyrrolopyridinyl, furopyridinyl, thienopyridinyl, pyrrolopyridazinyl, pyrrolopyrimidinyl, pyrrolopyrazinyl, thienopyridazinyl, thienopyrimidinyl, thienopyrazinyl, furopyridazinyl, furopyrimidinyl, or furopyrazinyl; 
         each of R 1a  and R 1b  is independently hydrogen, halogen, —OH, C 1-3  alkyl, C 1-3  haloalkyl, C 1-3  alkoxy, C 1-3  hydroxyalkyl, and —CN, C 3-6  cycloalkyl, or C 3-6  spirocycloalkyl; 
         n is an integer of 2 or 3; 
         each of R 2a  and R 2b  is independently hydrogen, halogen, —OH, C 1-3  alkyl, C 1-3  haloalkyl, C 1-3  alkoxy, C 1-3  hydroxyalkyl, —CN, C 3-6  cycloalkyl, or C 3-6  spirocycloalkyl; 
         R 3a  and R 3b  are independently hydrogen, halogen, —OH, C 1-3  alkyl, C 1-3  haloalkyl, C 1-3  alkoxy, C 1-3  hydroxyalkyl, —CN, C 3-6  cycloalkyl, or C 3-6  spirocycloalkyl; 
         J is phenyl or pyridinyl; 
         each R 4  is independently hydrogen, halogen or C 1-3  alkyl; 
         s is an integer from 0 to 2; 
         G is C 1-3  alkyl; 
         p is 0 or 1; 
         E is substituted or unsubstituted azetidinyl or pyrrolidinyl; 
         each R 5  is independently hydrogen, halogen, —OH, —CN, C 1-5  alkoxy or C 1-5  hydroxyalkyl; 
         v is an integer from 1 to 5; 
         R 6  is halogen or —CN; 
         R 10  is H or C 1-3  alkyl; 
         the CHO moiety and the nitrogen atom linking J and G are located in the para position with respect to each other on J on the compound of formula (IX); 
         PG is an aldehyde protecting group, 
         CH-PG and the nitrogen atom linking J and G are located in the para position with respect to each other on J on the compound of formula (XI); and 
         each asterisk independently represents a chiral center wherein the carbon bearing R 3a  and R 3b  is a chiral center when R 3a  and R 3b  are different. 
       
     
     
       32. The process of  claim 31 , wherein B is a substituted or unsubstituted indolyl, benzofuranyl, or benzothiophenyl. 
     
     
       33. The process of  claim 32 , wherein B is a substituted or unsubstituted indolyl. 
     
     
       34. The process of  claim 31 , wherein B is a substituted or unsubstituted pyrrolopyridazinyl, pyrrolopyrimidinyl, or pyrrolopyrazinyl. 
     
     
       35. The process of  claim 31 , wherein B is substituted with one or two substituents independently fluorine, chlorine, C 1-3  alkyl, C 1-3  haloalkyl, —CN, —OH, C 1-3  alkoxy or C 1-3  hydroxyalkyl. 
     
     
       36. The process of  claim 31 , wherein each of R 1a  and R 1b  is independently hydrogen, F, —Cl, —OH, —CN, —CH 3 , —CF 3 , —CHF 2 , —CH 2 F, or spirocyclopropyl. 
     
     
       37. The process of  claim 31 , wherein n is 3. 
     
     
       38. The process of  claim 31 , wherein: 
       
         
           
           
               
               
           
         
       
     
     
       39. The process of  claim 31 , wherein each of R 2a  and R 2b  is hydrogen. 
     
     
       40. The process of  claim 31 , wherein R 3a  and R 3b  are independently hydrogen or —CH 3 . 
     
     
       41. The process of  claim 31 , wherein J is phenyl. 
     
     
       42. The process of  claim 31 , wherein the structure of the moiety of formula 
       
         
           
           
               
               
           
         
       
       of Compound (VIII), Compound (IX), and Compound (XI) is: 
       
         
           
           
               
               
           
         
         wherein each R 5  is hydrogen. 
       
     
     
       43. The process of  claim 31 , wherein each R 4  is fluorine. 
     
     
       44. The process of  claim 31 , wherein s is 2. 
     
     
       45. The process of  claim 31 , wherein p is 0. 
     
     
       46. The process of  claim 31 , wherein v is 3. 
     
     
       47. The process of  claim 31 , wherein R 6  is fluorine. 
     
     
       48. The process of  claim 31 , wherein the compound of formula (IV) is: 
       
         
           
           
               
               
           
         
       
       or salt thereof, including stereoisomers thereof. 
     
     
       49. The process of  claim 31 , wherein the compound of formula (IX) is: 
       
         
           
           
               
               
           
         
       
       or a salt thereof. 
     
     
       50. The process of  claim 31 , wherein the compound of formula (XI) is: 
       
         
           
           
               
               
           
         
       
       or a salt thereof. 
     
     
       51. The process of  claim 31 , wherein the compound of formula (VIII) is: 
       
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         
           
           
               
               
           
         
       
       or a pharmaceutically acceptable salt thereof including stereoisomers thereof. 
     
     
       52. The process of  claim 31 , further comprising contacting the compound of formula (VIII) with (2R-3R)-tartaric acid in the presence of an organic solvent. 
     
     
       53. The process of  claim 31 , wherein the compound of formula (VIII) is: 
       
         
           
           
               
               
           
         
         or a pharmaceutically acceptable salt thereof. 
       
     
     
       54. The process of  claim 53 , wherein the compound of formula (VIII) is: 
       
         
           
           
               
               
           
         
       
     
     
       55. The process of  claim 31 , further comprising crystallizing the compound of formula (VIII) as the tartaric acid salt thereof. 
     
     
       56. A process for preparing a compound of formula (IX) or a salt thereof, the process comprising:
 (1) reacting a reaction mixture comprising a compound of formula (X), an ethane-1,2-disulfonate salt of a compound of formula (VII), an organic solvent and a catalyst to form a compound of formula (XI) according to step 1 below 
 
       
         
           
           
               
               
           
         
         
           wherein 
         
         J is phenyl or pyridinyl; 
         each R 4  is independently hydrogen, halogen or C 1-3  alkyl, 
         s is an integer from 0 to 2, 
         LG is a leaving group, h 
         PG is an aldehyde protecting group, 
         LG and CH-PG are located in the para position with respect to each other on J, 
         G is C 1-3  alkyl, 
         p is 0 or 1, 
         E is substituted or unsubstituted azetidinyl or pyrrolidinyl, 
         each R 5  is independently hydrogen, halogen, —OH, —CN, C 1-5  alkoxy or C 1-5  hydroxyalkyl, 
         v is an integer from 1 to 5, 
         R 6  is halogen or —CN, and 
         R 10  is hydrogen or C 1 -C 3  alkyl; and 
         (2) deprotecting the compound of formula (XI) to form the compound of formula (IX) according to step 2 below 
       
       
         
           
           
               
               
           
         
       
     
     
       57. The process of  claim 56 , wherein J is phenyl. 
     
     
       58. The process of  claim 56 , wherein each R 4  is fluorine. 
     
     
       59. The process of  claim 56 , wherein s is 2. 
     
     
       60. The process of  claim 56 , wherein the leaving group is bromine. 
     
     
       61. The process of  claim 56 , wherein p is 0. 
     
     
       62. The process of  claim 56 , wherein the structure of the moiety of formula 
       
         
           
           
               
               
           
         
       
       of Compound (VIII), Compound (IX), and Compound (XI) is: 
       
         
           
           
               
               
           
         
         wherein each R 5  is hydrogen. 
       
     
     
       63. The process of  claim 56 , wherein v is 3. 
     
     
       64. The process of  claim 56 , wherein R 6  is fluorine. 
     
     
       65. The process of  claim 56 , wherein the compound of formula (VII) is a salt of an acid. 
     
     
       66. The process of  claim 56 , wherein the aldehyde protecting group is a trialkylorthoformate. 
     
     
       67. The process of  claim 56 , wherein the step 1 catalyst is a transition metal catalyst. 
     
     
       68. The process of  claim 56 , wherein the compound of formula (XI) is deprotected by contact with an acid. 
     
     
       69. The process of  claim 56 , wherein the compound of formula (IX) is: 
       
         
           
           
               
               
           
         
       
       or a salt thereof. 
     
     
       70. A process for the preparation of Compound B, 
       
         
           
           
               
               
           
         
         wherein the process comprises the steps of: 
         step (1): contacting a compound 
       
       
         
           
           
               
               
           
         
       
       with p-toluenesulfonic acid (p-TsOH) and triethyl orthoformate ((EtO) 3 CH) in a solvent comprising toluene to yield a compound of formula 
       
         
           
           
               
               
           
         
         step (2): contacting the compound of formula 
       
       
         
           
           
               
               
           
         
       
       from step 1 with a compound of formula 
       
         
           
           
               
               
           
         
       
       and NaOt-Bu followed by BrettPhos Pd G3, in a solvent comprising toluene to yield a compound of formula 
       
         
           
           
               
               
           
         
         step (3): contacting the compound of formula 
       
       
         
           
           
               
               
           
         
       
       of step 2 with acetic acid in water to yield a compound of formula 
       
         
           
           
               
               
           
         
         step (4): contacting the compound of formula 
       
       
         
           
           
               
               
           
         
       
       of step (3) with a compound of formula 
       
         
           
           
               
               
           
         
       
       (4),
 wherein the compound of formula (4) is prepared according to the process: 
 
       
         
           
           
               
               
           
         
       
       and L-Tartaric Acid in ethanol to yield the compound of formula (B). 
     
     
       71. The process of  claim 70 , wherein the process further comprises recrystallization of Compound B in methanol and ethanol; 
       
         
           
           
               
               
           
         
       
     
     
       72. The process of  claim 70 , wherein the process further comprises recrystallization of Compound B in MTBE, water, NaOH and ethanol;

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